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Sequence, Chains, Asymmetric and Biological Units

Title NMR VALIDATED MODEL OF DOMAIN IIID OF HEPATITIS C VIRUS INTERNAL RIBOSOME ENTRY SITE
Keywords TRANS WOBBLE G.U PAIR, S-TURN, SARCIN-RICIN LOOP, LOOP E MOTIF, SHEARED G.A PAIR, REVERSE HOOGSTEEN A.U PAIR, RNA
Experiment NMR
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1FQZ     released     available     available     Quaternary Structure Server  
NDB   1FQZ                         


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  RNA    A 27 881 0
total       27 881 0

Nucleic acids
Unit 1 G1 C2 C3 G4 A5 G6 U7 A8 G9 U10 G11 U12 U13 G14 G15 G16 U17 C18 G19 C20 G21 A22 A23 A24 G25 G26 C27

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany