1FDZ - Sequence, Chains, Asymmetric and Biological Units

• Title: N-ACETYLNEURAMINATE LYASE IN COMPLEX WITH PYRUVATE VIA BOROH REDUCTION
• Keywords: LYASE, ALDOLASE, OXO-ACID LYASE, ALPHA-KETO-ACID LYASE, CARB LYASE
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	1FDZ	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	N-ACETYLNEURAMINATE LYASE	A	292	2256	0
2	Protein	N-ACETYLNEURAMINATE LYASE	B	291	2247	0
3	Protein	N-ACETYLNEURAMINATE LYASE	C	291	2247	0
4	Protein	N-ACETYLNEURAMINATE LYASE	D	292	2256	0
5	Ligand	N-ACETYLNEURAMINATE LYASE	A	1	0	5
6	Ligand	N-ACETYLNEURAMINATE LYASE	B	1	0	5
7	Ligand	N-ACETYLNEURAMINATE LYASE	C	1	0	5
8	Ligand	N-ACETYLNEURAMINATE LYASE	D	1	0	5
9	Water			228	0	228
total				1398	9006	248

Proteins

Unit 1	ASN 4 LEU 5 ARG 6 GLY 7 VAL 8 MET 9 ALA 10 ALA 11 LEU 12 LEU 13 THR 14 PRO 15 PHE 16 ASP 17 GLN 18 GLN 19 GLN 20 ALA 21 LEU 22 ASP 23 LYS 24 ALA 25 SER 26 LEU 27 ARG 28 ARG 29 LEU 30 VAL 31 GLN 32 PHE 33 ASN 34 ILE 35 GLN 36 GLN 37 GLY 38 ILE 39 ASP 40 GLY 41 LEU 42 TYR 43 VAL 44 GLY 45 GLY 46 SER 47 THR 48 GLY 49 GLU 50 ALA 51 PHE 52 VAL 53 GLN 54 SER 55 LEU 56 SER 57 GLU 58 ARG 59 GLU 60 GLN 61 VAL 62 LEU 63 GLU 64 ILE 65 VAL 66 ALA 67 GLU 68 GLU 69 GLY 70 LYS 71 GLY 72 LYS 73 ILE 74 LYS 75 LEU 76 ILE 77 ALA 78 HIS 79 VAL 80 GLY 81 CYS 82 VAL 83 THR 84 THR 85 ALA 86 GLU 87 SER 88 GLN 89 GLN 90 LEU 91 ALA 92 ALA 93 SER 94 ALA 95 LYS 96 ARG 97 TYR 98 GLY 99 PHE 100 ASP 101 ALA 102 VAL 103 SER 104 ALA 105 VAL 106 THR 107 PRO 108 PHE 109 TYR 110 TYR 111 PRO 112 PHE 113 SER 114 PHE 115 GLU 116 GLU 117 HIS 118 CYS 119 ASP 120 HIS 121 TYR 122 ARG 123 ALA 124 ILE 125 ILE 126 ASP 127 SER 128 ALA 129 ASP 130 GLY 131 LEU 132 PRO 133 MET 134 VAL 135 VAL 136 TYR 137 ASN 138 ILE 139 PRO 140 ALA 141 LEU 142 SER 143 GLY 144 VAL 145 LYS 146 LEU 147 THR 148 LEU 149 ASP 150 GLN 151 ILE 152 ASN 153 THR 154 LEU 155 VAL 156 THR 157 LEU 158 PRO 159 GLY 160 VAL 161 GLY 162 ALA 163 LEU 164 LYS 165 GLN 166 THR 167 SER 168 GLY 169 ASP 170 LEU 171 TYR 172 GLN 173 MET 174 GLU 175 GLN 176 ILE 177 ARG 178 ARG 179 GLU 180 HIS 181 PRO 182 ASP 183 LEU 184 VAL 185 LEU 186 TYR 187 ASN 188 GLY 189 TYR 190 ASP 191 GLU 192 ILE 193 PHE 194 ALA 195 SER 196 GLY 197 LEU 198 LEU 199 ALA 200 GLY 201 ALA 202 ASP 203 GLY 204 GLY 205 ILE 206 GLY 207 SER 208 THR 209 TYR 210 ASN 211 ILE 212 MET 213 GLY 214 TRP 215 ARG 216 TYR 217 GLN 218 GLY 219 ILE 220 VAL 221 LYS 222 ALA 223 LEU 224 LYS 225 GLU 226 GLY 227 ASP 228 ILE 229 GLN 230 THR 231 ALA 232 GLN 233 LYS 234 LEU 235 GLN 236 THR 237 GLU 238 CYS 239 ASN 240 LYS 241 VAL 242 ILE 243 ASP 244 LEU 245 LEU 246 ILE 247 LYS 248 THR 249 GLY 250 VAL 251 PHE 252 ARG 253 GLY 254 LEU 255 LYS 256 THR 257 VAL 258 LEU 259 HIS 260 TYR 261 MET 262 ASP 263 VAL 264 VAL 265 SER 266 VAL 267 PRO 268 LEU 269 CYS 270 ARG 271 LYS 272 PRO 273 PHE 274 GLY 275 PRO 276 VAL 277 ASP 278 GLU 279 LYS 280 TYR 281 LEU 282 PRO 283 GLU 284 LEU 285 LYS 286 ALA 287 LEU 288 ALA 289 GLN 290 GLN 291 LEU 292 MET 293 GLN 294 GLU 295
Unit 2	ASN 4 LEU 5 ARG 6 GLY 7 VAL 8 MET 9 ALA 10 ALA 11 LEU 12 LEU 13 THR 14 PRO 15 PHE 16 ASP 17 GLN 18 GLN 19 GLN 20 ALA 21 LEU 22 ASP 23 LYS 24 ALA 25 SER 26 LEU 27 ARG 28 ARG 29 LEU 30 VAL 31 GLN 32 PHE 33 ASN 34 ILE 35 GLN 36 GLN 37 GLY 38 ILE 39 ASP 40 GLY 41 LEU 42 TYR 43 VAL 44 GLY 45 GLY 46 SER 47 THR 48 GLY 49 GLU 50 ALA 51 PHE 52 VAL 53 GLN 54 SER 55 LEU 56 SER 57 GLU 58 ARG 59 GLU 60 GLN 61 VAL 62 LEU 63 GLU 64 ILE 65 VAL 66 ALA 67 GLU 68 GLU 69 GLY 70 LYS 71 GLY 72 LYS 73 ILE 74 LYS 75 LEU 76 ILE 77 ALA 78 HIS 79 VAL 80 GLY 81 CYS 82 VAL 83 THR 84 THR 85 ALA 86 GLU 87 SER 88 GLN 89 GLN 90 LEU 91 ALA 92 ALA 93 SER 94 ALA 95 LYS 96 ARG 97 TYR 98 GLY 99 PHE 100 ASP 101 ALA 102 VAL 103 SER 104 ALA 105 VAL 106 THR 107 PRO 108 PHE 109 TYR 110 TYR 111 PRO 112 PHE 113 SER 114 PHE 115 GLU 116 GLU 117 HIS 118 CYS 119 ASP 120 HIS 121 TYR 122 ARG 123 ALA 124 ILE 125 ILE 126 ASP 127 SER 128 ALA 129 ASP 130 GLY 131 LEU 132 PRO 133 MET 134 VAL 135 VAL 136 TYR 137 ASN 138 ILE 139 PRO 140 ALA 141 LEU 142 SER 143 GLY 144 VAL 145 LYS 146 LEU 147 THR 148 LEU 149 ASP 150 GLN 151 ILE 152 ASN 153 THR 154 LEU 155 VAL 156 THR 157 LEU 158 PRO 159 GLY 160 VAL 161 GLY 162 ALA 163 LEU 164 LYS 165 GLN 166 THR 167 SER 168 GLY 169 ASP 170 LEU 171 TYR 172 GLN 173 MET 174 GLU 175 GLN 176 ILE 177 ARG 178 ARG 179 GLU 180 HIS 181 PRO 182 ASP 183 LEU 184 VAL 185 LEU 186 TYR 187 ASN 188 GLY 189 TYR 190 ASP 191 GLU 192 ILE 193 PHE 194 ALA 195 SER 196 GLY 197 LEU 198 LEU 199 ALA 200 GLY 201 ALA 202 ASP 203 GLY 204 GLY 205 ILE 206 GLY 207 SER 208 THR 209 TYR 210 ASN 211 ILE 212 MET 213 GLY 214 TRP 215 ARG 216 TYR 217 GLN 218 GLY 219 ILE 220 VAL 221 LYS 222 ALA 223 LEU 224 LYS 225 GLU 226 GLY 227 ASP 228 ILE 229 GLN 230 THR 231 ALA 232 GLN 233 LYS 234 LEU 235 GLN 236 THR 237 GLU 238 CYS 239 ASN 240 LYS 241 VAL 242 ILE 243 ASP 244 LEU 245 LEU 246 ILE 247 LYS 248 THR 249 GLY 250 VAL 251 PHE 252 ARG 253 GLY 254 LEU 255 LYS 256 THR 257 VAL 258 LEU 259 HIS 260 TYR 261 MET 262 ASP 263 VAL 264 VAL 265 SER 266 VAL 267 PRO 268 LEU 269 CYS 270 ARG 271 LYS 272 PRO 273 PHE 274 GLY 275 PRO 276 VAL 277 ASP 278 GLU 279 LYS 280 TYR 281 LEU 282 PRO 283 GLU 284 LEU 285 LYS 286 ALA 287 LEU 288 ALA 289 GLN 290 GLN 291 LEU 292 MET 293 GLN 294
Unit 3	ASN 4 LEU 5 ARG 6 GLY 7 VAL 8 MET 9 ALA 10 ALA 11 LEU 12 LEU 13 THR 14 PRO 15 PHE 16 ASP 17 GLN 18 GLN 19 GLN 20 ALA 21 LEU 22 ASP 23 LYS 24 ALA 25 SER 26 LEU 27 ARG 28 ARG 29 LEU 30 VAL 31 GLN 32 PHE 33 ASN 34 ILE 35 GLN 36 GLN 37 GLY 38 ILE 39 ASP 40 GLY 41 LEU 42 TYR 43 VAL 44 GLY 45 GLY 46 SER 47 THR 48 GLY 49 GLU 50 ALA 51 PHE 52 VAL 53 GLN 54 SER 55 LEU 56 SER 57 GLU 58 ARG 59 GLU 60 GLN 61 VAL 62 LEU 63 GLU 64 ILE 65 VAL 66 ALA 67 GLU 68 GLU 69 GLY 70 LYS 71 GLY 72 LYS 73 ILE 74 LYS 75 LEU 76 ILE 77 ALA 78 HIS 79 VAL 80 GLY 81 CYS 82 VAL 83 THR 84 THR 85 ALA 86 GLU 87 SER 88 GLN 89 GLN 90 LEU 91 ALA 92 ALA 93 SER 94 ALA 95 LYS 96 ARG 97 TYR 98 GLY 99 PHE 100 ASP 101 ALA 102 VAL 103 SER 104 ALA 105 VAL 106 THR 107 PRO 108 PHE 109 TYR 110 TYR 111 PRO 112 PHE 113 SER 114 PHE 115 GLU 116 GLU 117 HIS 118 CYS 119 ASP 120 HIS 121 TYR 122 ARG 123 ALA 124 ILE 125 ILE 126 ASP 127 SER 128 ALA 129 ASP 130 GLY 131 LEU 132 PRO 133 MET 134 VAL 135 VAL 136 TYR 137 ASN 138 ILE 139 PRO 140 ALA 141 LEU 142 SER 143 GLY 144 VAL 145 LYS 146 LEU 147 THR 148 LEU 149 ASP 150 GLN 151 ILE 152 ASN 153 THR 154 LEU 155 VAL 156 THR 157 LEU 158 PRO 159 GLY 160 VAL 161 GLY 162 ALA 163 LEU 164 LYS 165 GLN 166 THR 167 SER 168 GLY 169 ASP 170 LEU 171 TYR 172 GLN 173 MET 174 GLU 175 GLN 176 ILE 177 ARG 178 ARG 179 GLU 180 HIS 181 PRO 182 ASP 183 LEU 184 VAL 185 LEU 186 TYR 187 ASN 188 GLY 189 TYR 190 ASP 191 GLU 192 ILE 193 PHE 194 ALA 195 SER 196 GLY 197 LEU 198 LEU 199 ALA 200 GLY 201 ALA 202 ASP 203 GLY 204 GLY 205 ILE 206 GLY 207 SER 208 THR 209 TYR 210 ASN 211 ILE 212 MET 213 GLY 214 TRP 215 ARG 216 TYR 217 GLN 218 GLY 219 ILE 220 VAL 221 LYS 222 ALA 223 LEU 224 LYS 225 GLU 226 GLY 227 ASP 228 ILE 229 GLN 230 THR 231 ALA 232 GLN 233 LYS 234 LEU 235 GLN 236 THR 237 GLU 238 CYS 239 ASN 240 LYS 241 VAL 242 ILE 243 ASP 244 LEU 245 LEU 246 ILE 247 LYS 248 THR 249 GLY 250 VAL 251 PHE 252 ARG 253 GLY 254 LEU 255 LYS 256 THR 257 VAL 258 LEU 259 HIS 260 TYR 261 MET 262 ASP 263 VAL 264 VAL 265 SER 266 VAL 267 PRO 268 LEU 269 CYS 270 ARG 271 LYS 272 PRO 273 PHE 274 GLY 275 PRO 276 VAL 277 ASP 278 GLU 279 LYS 280 TYR 281 LEU 282 PRO 283 GLU 284 LEU 285 LYS 286 ALA 287 LEU 288 ALA 289 GLN 290 GLN 291 LEU 292 MET 293 GLN 294
Unit 4	ASN 4 LEU 5 ARG 6 GLY 7 VAL 8 MET 9 ALA 10 ALA 11 LEU 12 LEU 13 THR 14 PRO 15 PHE 16 ASP 17 GLN 18 GLN 19 GLN 20 ALA 21 LEU 22 ASP 23 LYS 24 ALA 25 SER 26 LEU 27 ARG 28 ARG 29 LEU 30 VAL 31 GLN 32 PHE 33 ASN 34 ILE 35 GLN 36 GLN 37 GLY 38 ILE 39 ASP 40 GLY 41 LEU 42 TYR 43 VAL 44 GLY 45 GLY 46 SER 47 THR 48 GLY 49 GLU 50 ALA 51 PHE 52 VAL 53 GLN 54 SER 55 LEU 56 SER 57 GLU 58 ARG 59 GLU 60 GLN 61 VAL 62 LEU 63 GLU 64 ILE 65 VAL 66 ALA 67 GLU 68 GLU 69 GLY 70 LYS 71 GLY 72 LYS 73 ILE 74 LYS 75 LEU 76 ILE 77 ALA 78 HIS 79 VAL 80 GLY 81 CYS 82 VAL 83 THR 84 THR 85 ALA 86 GLU 87 SER 88 GLN 89 GLN 90 LEU 91 ALA 92 ALA 93 SER 94 ALA 95 LYS 96 ARG 97 TYR 98 GLY 99 PHE 100 ASP 101 ALA 102 VAL 103 SER 104 ALA 105 VAL 106 THR 107 PRO 108 PHE 109 TYR 110 TYR 111 PRO 112 PHE 113 SER 114 PHE 115 GLU 116 GLU 117 HIS 118 CYS 119 ASP 120 HIS 121 TYR 122 ARG 123 ALA 124 ILE 125 ILE 126 ASP 127 SER 128 ALA 129 ASP 130 GLY 131 LEU 132 PRO 133 MET 134 VAL 135 VAL 136 TYR 137 ASN 138 ILE 139 PRO 140 ALA 141 LEU 142 SER 143 GLY 144 VAL 145 LYS 146 LEU 147 THR 148 LEU 149 ASP 150 GLN 151 ILE 152 ASN 153 THR 154 LEU 155 VAL 156 THR 157 LEU 158 PRO 159 GLY 160 VAL 161 GLY 162 ALA 163 LEU 164 LYS 165 GLN 166 THR 167 SER 168 GLY 169 ASP 170 LEU 171 TYR 172 GLN 173 MET 174 GLU 175 GLN 176 ILE 177 ARG 178 ARG 179 GLU 180 HIS 181 PRO 182 ASP 183 LEU 184 VAL 185 LEU 186 TYR 187 ASN 188 GLY 189 TYR 190 ASP 191 GLU 192 ILE 193 PHE 194 ALA 195 SER 196 GLY 197 LEU 198 LEU 199 ALA 200 GLY 201 ALA 202 ASP 203 GLY 204 GLY 205 ILE 206 GLY 207 SER 208 THR 209 TYR 210 ASN 211 ILE 212 MET 213 GLY 214 TRP 215 ARG 216 TYR 217 GLN 218 GLY 219 ILE 220 VAL 221 LYS 222 ALA 223 LEU 224 LYS 225 GLU 226 GLY 227 ASP 228 ILE 229 GLN 230 THR 231 ALA 232 GLN 233 LYS 234 LEU 235 GLN 236 THR 237 GLU 238 CYS 239 ASN 240 LYS 241 VAL 242 ILE 243 ASP 244 LEU 245 LEU 246 ILE 247 LYS 248 THR 249 GLY 250 VAL 251 PHE 252 ARG 253 GLY 254 LEU 255 LYS 256 THR 257 VAL 258 LEU 259 HIS 260 TYR 261 MET 262 ASP 263 VAL 264 VAL 265 SER 266 VAL 267 PRO 268 LEU 269 CYS 270 ARG 271 LYS 272 PRO 273 PHE 274 GLY 275 PRO 276 VAL 277 ASP 278 GLU 279 LYS 280 TYR 281 LEU 282 PRO 283 GLU 284 LEU 285 LYS 286 ALA 287 LEU 288 ALA 289 GLN 290 GLN 291 LEU 292 MET 293 GLN 294 GLU 295

Ligands

Unit 5	PYR 302
Unit 6	PYR 304
Unit 7	PYR 306
Unit 8	PYR 308