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Title | OXIDIZED FORM OF FORMATE DEHYDROGENASE H FROM E. COLI COMPLE THE INHIBITOR NITRITE | |
Keywords | OXIDOREDUCTASE, SELENIUM, SELENOCYSTEINE, SECYS, MOLYBDENUM, MOLYBDOPTERIN, MPT, MOLYBDOPTERIN GUANINE DINUCLEOTIDE, MGD SULFUR CLUSTER, FE4S4, FORMATE, DEHYDROGENASE, ANAEROBIC | |
Experiment | X-ray diffraction | |
Number of Models | 1 |
Database | ID code | Status | Coordinate files | ||
Header | Asymmetric unit | Biological unit | |||
PDB | 1FDI | released | available | available | Quaternary Structure Server |
Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
---|---|---|---|---|---|---|
1 | Protein | FORMATE DEHYDROGENASE H | A | 715 | 5575 | 0 |
2 | Ligand | FORMATE DEHYDROGENASE H | A | 5 | 0 | 106 |
3 | Water | 62 | 0 | 62 | ||
total | 782 | 5575 | 168 |
Unit 1 | MET1 LYS2 LYS3 VAL4 VAL5 THR6 VAL7 CYS8 PRO9 TYR10 CYS11 ALA12 SER13 GLY14 CYS15 LYS16 ILE17 ASN18 LEU19 VAL20 VAL21 ASP22 ASN23 GLY24 LYS25 ILE26 VAL27 ARG28 ALA29 GLU30 ALA31 ALA32 GLN33 GLY34 LYS35 THR36 ASN37 GLN38 GLY39 THR40 LEU41 CYS42 LEU43 LYS44 GLY45 TYR46 TYR47 GLY48 TRP49 ASP50 PHE51 ILE52 ASN53 ASP54 THR55 GLN56 ILE57 LEU58 THR59 PRO60 ARG61 LEU62 LYS63 THR64 PRO65 MET66 ILE67 ARG68 ARG69 GLN70 ARG71 GLY72 GLY73 LYS74 LEU75 GLU76 PRO77 VAL78 SER79 TRP80 ASP81 GLU82 ALA83 LEU84 ASN85 TYR86 VAL87 ALA88 GLU89 ARG90 LEU91 SER92 ALA93 ILE94 LYS95 GLU96 LYS97 TYR98 GLY99 PRO100 ASP101 ALA102 ILE103 GLN104 THR105 THR106 GLY107 SER108 SER109 ARG110 GLY111 THR112 GLY113 ASN114 GLU115 THR116 ASN117 TYR118 VAL119 MET120 GLN121 LYS122 PHE123 ALA124 ARG125 ALA126 VAL127 ILE128 GLY129 THR130 ASN131 ASN132 VAL133 ASP134 CYS135 CYS136 ALA137 ARG138 VAL139 SEC140 HIS141 GLY142 PRO143 SER144 VAL145 ALA146 GLY147 LEU148 HIS149 GLN150 SER151 VAL152 GLY153 ASN154 GLY155 ALA156 MET157 SER158 ASN159 ALA160 ILE161 ASN162 GLU163 ILE164 ASP165 ASN166 THR167 ASP168 LEU169 VAL170 PHE171 VAL172 PHE173 GLY174 TYR175 ASN176 PRO177 ALA178 ASP179 SER180 HIS181 PRO182 ILE183 VAL184 ALA185 ASN186 HIS187 VAL188 ILE189 ASN190 ALA191 LYS192 ARG193 ASN194 GLY195 ALA196 LYS197 ILE198 ILE199 VAL200 CYS201 ASP202 PRO203 ARG204 LYS205 ILE206 GLU207 THR208 ALA209 ARG210 ILE211 ALA212 ASP213 MET214 HIS215 ILE216 ALA217 LEU218 LYS219 ASN220 GLY221 SER222 ASN223 ILE224 ALA225 LEU226 LEU227 ASN228 ALA229 MET230 GLY231 HIS232 VAL233 ILE234 ILE235 GLU236 GLU237 ASN238 LEU239 TYR240 ASP241 LYS242 ALA243 PHE244 VAL245 ALA246 SER247 ARG248 THR249 GLU250 GLY251 PHE252 GLU253 GLU254 TYR255 ARG256 LYS257 ILE258 VAL259 GLU260 GLY261 TYR262 THR263 PRO264 GLU265 SER266 VAL267 GLU268 ASP269 ILE270 THR271 GLY272 VAL273 SER274 ALA275 SER276 GLU277 ILE278 ARG279 GLN280 ALA281 ALA282 ARG283 MET284 TYR285 ALA286 GLN287 ALA288 LYS289 SER290 ALA291 ALA292 ILE293 LEU294 TRP295 GLY296 MET297 GLY298 VAL299 THR300 GLN301 PHE302 TYR303 GLN304 GLY305 VAL306 GLU307 THR308 VAL309 ARG310 SER311 LEU312 THR313 SER314 LEU315 ALA316 MET317 LEU318 THR319 GLY320 ASN321 LEU322 GLY323 LYS324 PRO325 HIS326 ALA327 GLY328 VAL329 ASN330 PRO331 VAL332 ARG333 GLY334 GLN335 ASN336 ASN337 VAL338 GLN339 GLY340 ALA341 CYS342 ASP343 MET344 GLY345 ALA346 LEU347 PRO348 ASP349 THR350 TYR351 PRO352 GLY353 TYR354 GLN355 TYR356 VAL357 LYS358 ASP359 PRO360 ALA361 ASN362 ARG363 GLU364 LYS365 PHE366 ALA367 LYS368 ALA369 TRP370 GLY371 VAL372 GLU373 SER374 LEU375 PRO376 ALA377 HIS378 THR379 GLY380 TYR381 ARG382 ILE383 SER384 GLU385 LEU386 PRO387 HIS388 ARG389 ALA390 ALA391 HIS392 GLY393 GLU394 VAL395 ARG396 ALA397 ALA398 TYR399 ILE400 MET401 GLY402 GLU403 ASP404 PRO405 LEU406 GLN407 THR408 ASP409 ALA410 GLU411 LEU412 SER413 ALA414 VAL415 ARG416 LYS417 ALA418 PHE419 GLU420 ASP421 LEU422 GLU423 LEU424 VAL425 ILE426 VAL427 GLN428 ASP429 ILE430 PHE431 MET432 THR433 LYS434 THR435 ALA436 SER437 ALA438 ALA439 ASP440 VAL441 ILE442 LEU443 PRO444 SER445 THR446 SER447 TRP448 GLY449 GLU450 HIS451 GLU452 GLY453 VAL454 PHE455 THR456 ALA457 ALA458 ASP459 ARG460 GLY461 PHE462 GLN463 ARG464 PHE465 PHE466 LYS467 ALA468 VAL469 GLU470 PRO471 LYS472 TRP473 ASP474 LEU475 LYS476 THR477 ASP478 TRP479 GLN480 ILE481 ILE482 SER483 GLU484 ILE485 ALA486 THR487 ARG488 MET489 GLY490 TYR491 PRO492 MET493 HIS494 TYR495 ASN496 ASN497 THR498 GLN499 GLU500 ILE501 TRP502 ASP503 GLU504 LEU505 ARG506 HIS507 LEU508 CYS509 PRO510 ASP511 PHE512 TYR513 GLY514 ALA515 THR516 TYR517 GLU518 LYS519 MET520 GLY521 GLU522 LEU523 GLY524 PHE525 ILE526 GLN527 TRP528 PRO529 CYS530 ARG531 ASP532 THR533 SER534 ASP535 ALA536 ASP537 GLN538 GLY539 THR540 SER541 TYR542 LEU543 PHE544 LYS545 GLU546 LYS547 PHE548 ASP549 THR550 PRO551 ASN552 GLY553 LEU554 ALA555 GLN556 PHE557 PHE558 THR559 CYS560 ASP561 TRP562 VAL563 ALA564 PRO565 ILE566 ASP567 LYS568 LEU569 THR570 ASP571 GLU572 TYR573 PRO574 MET575 VAL576 LEU577 SER578 THR579 VAL580 ARG581 GLU582 VAL583 GLY584 HIS585 TYR586 SER587 CYS588 ARG589 SER590 MET591 THR592 GLY593 ASN594 CYS595 ALA596 ALA597 LEU598 ALA599 ALA600 LEU601 ALA602 ASP603 GLU604 PRO605 GLY606 TYR607 ALA608 GLN609 ILE610 ASN611 THR612 GLU613 ASP614 ALA615 LYS616 ARG617 LEU618 GLY619 ILE620 GLU621 ASP622 GLU623 ALA624 LEU625 VAL626 TRP627 VAL628 HIS629 SER630 ARG631 LYS632 GLY633 LYS634 ILE635 ILE636 THR637 ARG638 ALA639 GLN640 VAL641 SER642 ASP643 ARG644 PRO645 ASN646 LYS647 GLY648 ALA649 ILE650 TYR651 MET652 THR653 TYR654 GLN655 TRP656 TRP657 ILE658 GLY659 ALA660 CYS661 ASN662 GLU663 LEU664 VAL665 THR666 GLU667 ASN668 LEU669 SER670 PRO671 ILE672 THR673 LYS674 THR675 PRO676 GLU677 TYR678 LYS679 TYR680 CYS681 ALA682 VAL683 ARG684 VAL685 GLU686 PRO687 ILE688 ALA689 ASP690 GLN691 ARG692 ALA693 ALA694 GLU695 GLN696 TYR697 VAL698 ILE699 ASP700 GLU701 TYR702 ASN703 LYS704 LEU705 LYS706 THR707 ARG708 LEU709 ARG710 GLU711 ALA712 ALA713 LEU714 ALA715 |
Unit 2 | SF4800 MGD801 MGD802 6MO803 NO2804 |
Perl script: | PDBscan.pl (15 Sep 2016) |
Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |