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Sequence, Chains, Asymmetric and Biological Units

Title THE STRUCTURE OF UDP-N-ACETYLGLUCOSAMINE 2-EPIMERASE FROM E. COLI.
Keywords SUGAR-NUCLEOTIDE EPIMERASE, ROSSMANN FOLD, TWO DOMAINS, GLYCOGEN PHOSPHORYLASE SUPERFAMILY, UDP, DIMER, ISOMERASE
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   1F6D     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   UDP-N-ACETYLGLUCOSAMINE 2-EPIMERASE  A 376 2892 80
2  Protein   UDP-N-ACETYLGLUCOSAMINE 2-EPIMERASE  B 372 2872 72
3  Protein   UDP-N-ACETYLGLUCOSAMINE 2-EPIMERASE  C 367 2827 72
4  Protein   UDP-N-ACETYLGLUCOSAMINE 2-EPIMERASE  D 374 2877 80
5  Ligand   UDP-N-ACETYLGLUCOSAMINE 2-EPIMERASE  A 3 0 27
6  Ligand   UDP-N-ACETYLGLUCOSAMINE 2-EPIMERASE  B 3 0 27
7  Ligand   UDP-N-ACETYLGLUCOSAMINE 2-EPIMERASE  C 3 0 27
8  Ligand   UDP-N-ACETYLGLUCOSAMINE 2-EPIMERASE  D 3 0 27
9 Water     765 0 765
total       2266 11468 1177
Proteins
Unit 1 MSE1 LYS2 VAL3 LEU4 THR5 VAL6 PHE7 GLY8 THR9 ARG10 PRO11 GLU12 ALA13 ILE14 LYS15 MSE16 ALA17 PRO18 LEU19 VAL20 HIS21 ALA22 LEU23 ALA24 LYS25 ASP26 PRO27 PHE28 PHE29 GLU30 ALA31 LYS32 VAL33 CYS34 VAL35 THR36 ALA37 GLN38 HIS39 ARG40 GLU41 MSE42 LEU43 ASP44 GLN45 VAL46 LEU47 LYS48 LEU49 PHE50 SER51 ILE52 VAL53 PRO54 ASP55 TYR56 ASP57 LEU58 ASN59 ILE60 MSE61 GLN62 PRO63 GLY64 GLN65 GLY66 LEU67 THR68 GLU69 ILE70 THR71 CYS72 ARG73 ILE74 LEU75 GLU76 GLY77 LEU78 LYS79 PRO80 ILE81 LEU82 ALA83 GLU84 PHE85 LYS86 PRO87 ASP88 VAL89 VAL90 LEU91 VAL92 HIS93 GLY94 ASP95 THR96 THR97 THR98 THR99 LEU100 ALA101 THR102 SER103 LEU104 ALA105 ALA106 PHE107 TYR108 GLN109 ARG110 ILE111 PRO112 VAL113 GLY114 HIS115 VAL116 GLU117 ALA118 GLY119 LEU120 ARG121 THR122 GLY123 ASP124 LEU125 TYR126 SER127 PRO128 TRP129 PRO130 GLU131 GLU132 ALA133 ASN134 ARG135 THR136 LEU137 THR138 GLY139 HIS140 LEU141 ALA142 MSE143 TYR144 HIS145 PHE146 SER147 PRO148 THR149 GLU150 THR151 SER152 ARG153 GLN154 ASN155 LEU156 LEU157 ARG158 GLU159 ASN160 VAL161 ALA162 ASP163 SER164 ARG165 ILE166 PHE167 ILE168 THR169 GLY170 ASN171 THR172 VAL173 ILE174 ASP175 ALA176 LEU177 LEU178 TRP179 VAL180 ARG181 ASP182 GLN183 VAL184 MSE185 SER186 SER187 ASP188 LYS189 LEU190 ARG191 SER192 GLU193 LEU194 ALA195 ALA196 ASN197 TYR198 PRO199 PHE200 ILE201 ASP202 PRO203 ASP204 LYS205 LYS206 MSE207 ILE208 LEU209 VAL210 THR211 GLY212 HIS213 ARG214 ARG215 GLU216 SER217 PHE218 GLY219 ARG220 GLY221 PHE222 GLU223 GLU224 ILE225 CYS226 HIS227 ALA228 LEU229 ALA230 ASP231 ILE232 ALA233 THR234 THR235 HIS236 GLN237 ASP238 ILE239 GLN240 ILE241 VAL242 TYR243 PRO244 VAL245 HIS246 LEU247 ASN248 PRO249 ASN250 VAL251 ARG252 GLU253 PRO254 VAL255 ASN256 ARG257 ILE258 LEU259 GLY260 HIS261 VAL262 LYS263 ASN264 VAL265 ILE266 LEU267 ILE268 ASP269 PRO270 GLN271 GLU272 TYR273 LEU274 PRO275 PHE276 VAL277 TRP278 LEU279 MSE280 ASN281 HIS282 ALA283 TRP284 LEU285 ILE286 LEU287 THR288 ASP289 SER290 GLY291 GLY292 ILE293 GLN294 GLU295 GLU296 ALA297 PRO298 SER299 LEU300 GLY301 LYS302 PRO303 VAL304 LEU305 VAL306 MSE307 ARG308 ASP309 THR310 THR311 GLU312 ARG313 PRO314 GLU315 ALA316 VAL317 THR318 ALA319 GLY320 THR321 VAL322 ARG323 LEU324 VAL325 GLY326 THR327 ASP328 LYS329 GLN330 ARG331 ILE332 VAL333 GLU334 GLU335 VAL336 THR337 ARG338 LEU339 LEU340 LYS341 ASP342 GLU343 ASN344 GLU345 TYR346 GLN347 ALA348 MSE349 SER350 ARG351 ALA352 HIS353 ASN354 PRO355 TYR356 GLY357 ASP358 GLY359 GLN360 ALA361 CYS362 SER363 ARG364 ILE365 LEU366 GLU367 ALA368 LEU369 LYS370 ASN371 ASN372 ARG373 ILE374 SER375 LEU376
Unit 2 MSE1 LYS2 VAL3 LEU4 THR5 VAL6 PHE7 GLY8 THR9 ARG10 PRO11 GLU12 ALA13 ILE14 LYS15 MSE16 ALA17 PRO18 LEU19 VAL20 HIS21 ALA22 LEU23 ALA24 LYS25 ASP26 PRO27 PHE28 PHE29 GLU30 ALA31 LYS32 VAL33 CYS34 VAL35 THR36 ALA37 GLN38 HIS39 ARG40 GLU41 MSE42 LEU43 ASP44 GLN45 VAL46 LEU47 LYS48 LEU49 PHE50 SER51 ILE52 VAL53 PRO54 ASP55 TYR56 ASP57 LEU58 ASN59 ILE60 GLN65 GLY66 LEU67 THR68 GLU69 ILE70 THR71 CYS72 ARG73 ILE74 LEU75 GLU76 GLY77 LEU78 LYS79 PRO80 ILE81 LEU82 ALA83 GLU84 PHE85 LYS86 PRO87 ASP88 VAL89 VAL90 LEU91 VAL92 HIS93 GLY94 ASP95 THR96 THR97 THR98 THR99 LEU100 ALA101 THR102 SER103 LEU104 ALA105 ALA106 PHE107 TYR108 GLN109 ARG110 ILE111 PRO112 VAL113 GLY114 HIS115 VAL116 GLU117 ALA118 GLY119 LEU120 ARG121 THR122 GLY123 ASP124 LEU125 TYR126 SER127 PRO128 TRP129 PRO130 GLU131 GLU132 ALA133 ASN134 ARG135 THR136 LEU137 THR138 GLY139 HIS140 LEU141 ALA142 MSE143 TYR144 HIS145 PHE146 SER147 PRO148 THR149 GLU150 THR151 SER152 ARG153 GLN154 ASN155 LEU156 LEU157 ARG158 GLU159 ASN160 VAL161 ALA162 ASP163 SER164 ARG165 ILE166 PHE167 ILE168 THR169 GLY170 ASN171 THR172 VAL173 ILE174 ASP175 ALA176 LEU177 LEU178 TRP179 VAL180 ARG181 ASP182 GLN183 VAL184 MSE185 SER186 SER187 ASP188 LYS189 LEU190 ARG191 SER192 GLU193 LEU194 ALA195 ALA196 ASN197 TYR198 PRO199 PHE200 ILE201 ASP202 PRO203 ASP204 LYS205 LYS206 MSE207 ILE208 LEU209 VAL210 THR211 GLY212 HIS213 ARG214 ARG215 GLU216 SER217 PHE218 GLY219 ARG220 GLY221 PHE222 GLU223 GLU224 ILE225 CYS226 HIS227 ALA228 LEU229 ALA230 ASP231 ILE232 ALA233 THR234 THR235 HIS236 GLN237 ASP238 ILE239 GLN240 ILE241 VAL242 TYR243 PRO244 VAL245 HIS246 LEU247 ASN248 PRO249 ASN250 VAL251 ARG252 GLU253 PRO254 VAL255 ASN256 ARG257 ILE258 LEU259 GLY260 HIS261 VAL262 LYS263 ASN264 VAL265 ILE266 LEU267 ILE268 ASP269 PRO270 GLN271 GLU272 TYR273 LEU274 PRO275 PHE276 VAL277 TRP278 LEU279 MSE280 ASN281 HIS282 ALA283 TRP284 LEU285 ILE286 LEU287 THR288 ASP289 SER290 GLY291 GLY292 ILE293 GLN294 GLU295 GLU296 ALA297 PRO298 SER299 LEU300 GLY301 LYS302 PRO303 VAL304 LEU305 VAL306 MSE307 ARG308 ASP309 THR310 THR311 GLU312 ARG313 PRO314 GLU315 ALA316 VAL317 THR318 ALA319 GLY320 THR321 VAL322 ARG323 LEU324 VAL325 GLY326 THR327 ASP328 LYS329 GLN330 ARG331 ILE332 VAL333 GLU334 GLU335 VAL336 THR337 ARG338 LEU339 LEU340 LYS341 ASP342 GLU343 ASN344 GLU345 TYR346 GLN347 ALA348 MSE349 SER350 ARG351 ALA352 HIS353 ASN354 PRO355 TYR356 GLY357 ASP358 GLY359 GLN360 ALA361 CYS362 SER363 ARG364 ILE365 LEU366 GLU367 ALA368 LEU369 LYS370 ASN371 ASN372 ARG373 ILE374 SER375 LEU376
Unit 3 MSE1 LYS2 VAL3 LEU4 THR5 VAL6 PHE7 GLY8 THR9 ARG10 PRO11 GLU12 ALA13 ILE14 LYS15 MSE16 ALA17 PRO18 LEU19 VAL20 HIS21 ALA22 LEU23 ALA24 LYS25 ASP26 PRO27 PHE28 PHE29 GLU30 ALA31 LYS32 VAL33 CYS34 VAL35 THR36 ALA37 GLN38 HIS39 ARG40 GLU41 MSE42 LEU43 ASP44 GLN45 VAL46 LEU47 LYS48 LEU49 PHE50 SER51 ILE52 VAL53 PRO54 ASP55 TYR56 ASP57 LEU58 ASN59 ILE60 GLY64 GLN65 GLY66 LEU67 THR68 GLU69 ILE70 THR71 CYS72 ARG73 ILE74 LEU75 GLU76 GLY77 LEU78 LYS79 PRO80 ILE81 LEU82 ALA83 GLU84 PHE85 LYS86 PRO87 ASP88 VAL89 VAL90 LEU91 VAL92 HIS93 GLY94 ASP95 THR96 THR97 THR98 THR99 LEU100 ALA101 THR102 SER103 LEU104 ALA105 ALA106 PHE107 TYR108 GLN109 ARG110 ILE111 PRO112 VAL113 GLY114 HIS115 VAL116 GLU117 ALA118 GLY119 LEU120 ARG121 THR122 GLY123 ASP124 LEU125 TYR126 SER127 PRO128 TRP129 PRO130 GLU131 GLU132 ALA133 ASN134 ARG135 THR136 LEU137 THR138 GLY139 HIS140 LEU141 ALA142 MSE143 TYR144 HIS145 PHE146 SER147 PRO148 THR149 GLU150 THR151 SER152 ARG153 GLN154 ASN155 LEU156 LEU157 ARG158 GLU159 ASN160 VAL161 ALA162 ASP163 SER164 ARG165 ILE166 PHE167 ILE168 THR169 GLY170 ASN171 THR172 VAL173 ILE174 ASP175 ALA176 LEU177 LEU178 TRP179 VAL180 ARG181 ASP182 GLN183 VAL184 MSE185 SER186 SER187 ASP188 LYS189 LEU190 ARG191 SER192 GLU193 LEU194 ALA195 ALA196 ASN197 TYR198 PRO199 PHE200 ILE201 ASP202 PRO203 ASP204 LYS205 LYS206 MSE207 ILE208 LEU209 VAL210 THR211 GLY212 HIS213 ARG214 PHE218 GLY219 ARG220 GLY221 PHE222 GLU223 GLU224 ILE225 CYS226 HIS227 ALA228 LEU229 ALA230 ASP231 ILE232 ALA233 THR234 THR235 HIS236 GLN237 ASP238 ILE239 GLN240 ILE241 VAL242 TYR243 PRO244 VAL245 HIS246 LEU247 ASN248 PRO249 ASN250 VAL251 ARG252 GLU253 PRO254 VAL255 ASN256 ARG257 ILE258 LEU259 GLY260 HIS261 VAL262 LYS263 ASN264 VAL265 ILE266 LEU267 ILE268 ASP269 PRO270 GLN271 GLU272 TYR273 LEU274 PRO275 PHE276 VAL277 TRP278 LEU279 MSE280 ASN281 HIS282 ALA283 TRP284 LEU285 ILE286 LEU287 THR288 ASP289 SER290 GLY291 GLY292 ILE293 GLN294 GLU295 GLU296 ALA297 PRO298 SER299 LEU300 GLY301 LYS302 PRO303 VAL304 LEU305 VAL306 MSE307 ARG308 ASP309 THR310 THR311 GLU312 ARG313 PRO314 GLU315 ALA316 VAL317 THR318 ALA319 GLY320 THR321 VAL322 ARG323 LEU324 VAL325 GLY326 THR327 ASP328 LYS329 GLN330 ARG331 ILE332 VAL333 GLU334 GLU335 VAL336 THR337 ARG338 LEU339 LEU340 LYS341 ASP342 GLU343 ASN344 GLU345 TYR346 GLN347 ALA348 MSE349 SER350 ARG351 ALA352 HIS353 ASN354 PRO355 TYR356 GLY357 ASP358 GLY359 GLN360 ALA361 CYS362 SER363 ARG364 ILE365 LEU366 GLU367 ALA368 LEU369 LYS370 ASN371 ASN372 ARG373
Unit 4 MSE1 LYS2 VAL3 LEU4 THR5 VAL6 PHE7 GLY8 THR9 ARG10 PRO11 GLU12 ALA13 ILE14 LYS15 MSE16 ALA17 PRO18 LEU19 VAL20 HIS21 ALA22 LEU23 ALA24 LYS25 ASP26 PRO27 PHE28 PHE29 GLU30 ALA31 LYS32 VAL33 CYS34 VAL35 THR36 ALA37 GLN38 HIS39 ARG40 GLU41 MSE42 LEU43 ASP44 GLN45 VAL46 LEU47 LYS48 LEU49 PHE50 SER51 ILE52 VAL53 PRO54 ASP55 TYR56 ASP57 LEU58 ASN59 ILE60 MSE61 GLN62 PRO63 GLY64 GLN65 GLY66 LEU67 THR68 GLU69 ILE70 THR71 CYS72 ARG73 ILE74 LEU75 GLU76 GLY77 LEU78 LYS79 PRO80 ILE81 LEU82 ALA83 GLU84 PHE85 LYS86 PRO87 ASP88 VAL89 VAL90 LEU91 VAL92 HIS93 GLY94 ASP95 THR96 THR97 THR98 THR99 LEU100 ALA101 THR102 SER103 LEU104 ALA105 ALA106 PHE107 TYR108 GLN109 ARG110 ILE111 PRO112 VAL113 GLY114 HIS115 VAL116 GLU117 ALA118 GLY119 LEU120 ARG121 THR122 GLY123 ASP124 LEU125 TYR126 SER127 PRO128 TRP129 PRO130 GLU131 GLU132 ALA133 ASN134 ARG135 THR136 LEU137 THR138 GLY139 HIS140 LEU141 ALA142 MSE143 TYR144 HIS145 PHE146 SER147 PRO148 THR149 GLU150 THR151 SER152 ARG153 GLN154 ASN155 LEU156 LEU157 ARG158 GLU159 ASN160 VAL161 ALA162 ASP163 SER164 ARG165 ILE166 PHE167 ILE168 THR169 GLY170 ASN171 THR172 VAL173 ILE174 ASP175 ALA176 LEU177 LEU178 TRP179 VAL180 ARG181 ASP182 GLN183 VAL184 MSE185 SER186 SER187 ASP188 LYS189 LEU190 ARG191 SER192 GLU193 LEU194 ALA195 ALA196 ASN197 TYR198 PRO199 PHE200 ILE201 ASP202 PRO203 ASP204 LYS205 LYS206 MSE207 ILE208 LEU209 VAL210 THR211 GLY212 HIS213 ARG214 ARG215 GLU216 SER217 PHE218 GLY219 ARG220 GLY221 PHE222 GLU223 GLU224 ILE225 CYS226 HIS227 ALA228 LEU229 ALA230 ASP231 ILE232 ALA233 THR234 THR235 HIS236 GLN237 ASP238 ILE239 GLN240 ILE241 VAL242 TYR243 PRO244 VAL245 HIS246 LEU247 ASN248 PRO249 ASN250 VAL251 ARG252 GLU253 PRO254 VAL255 ASN256 ARG257 ILE258 LEU259 GLY260 HIS261 VAL262 LYS263 ASN264 VAL265 ILE266 LEU267 ILE268 ASP269 PRO270 GLN271 GLU272 TYR273 LEU274 PRO275 PHE276 VAL277 TRP278 LEU279 MSE280 ASN281 HIS282 ALA283 TRP284 LEU285 ILE286 LEU287 THR288 ASP289 SER290 GLY291 GLY292 ILE293 GLN294 GLU295 GLU296 ALA297 PRO298 SER299 LEU300 GLY301 LYS302 PRO303 VAL304 LEU305 VAL306 MSE307 ARG308 ASP309 THR310 THR311 GLU312 ARG313 PRO314 GLU315 ALA316 VAL317 THR318 ALA319 GLY320 THR321 VAL322 ARG323 LEU324 VAL325 GLY326 THR327 ASP328 LYS329 GLN330 ARG331 ILE332 VAL333 GLU334 GLU335 VAL336 THR337 ARG338 LEU339 LEU340 LYS341 ASP342 GLU343 ASN344 GLU345 TYR346 GLN347 ALA348 MSE349 SER350 ARG351 ALA352 HIS353 ASN354 PRO355 TYR356 GLY357 ASP358 GLY359 GLN360 ALA361 CYS362 SER363 ARG364 ILE365 LEU366 GLU367 ALA368 LEU369 LYS370 ASN371 ASN372 ARG373 ILE374
Ligands
Unit 5 UDP1377 NA1378 CL1379
Unit 6 UDP2377 NA2378 CL2379
Unit 7 UDP3377 NA3378 CL3379
Unit 8 UDP4377 NA4378 CL4379
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany