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Sequence, Chains, Asymmetric and Biological Units

Title SOLUTION STRUCTURE OF THE KISSING DIMER OF H3 GACG STEM- LOOP IN THE 5'-END DIMERIZATION SIGNAL OF MOLONEY MURINE LEUKEMIA VIRUS GENOMIC RNA
Keywords NMR, RETROVIRUS, MOLONEY MURINE LEUKEMIA VIRUS, DIMERIZATION, TETRALOOP, STEM-LOOP, KISSING DIMER, RNA
Experiment NMR
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1F5U     released     available     available     Quaternary Structure Server  
NDB   1F5U                         


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  RNA    A 18 581 0
2  RNA    B 18 581 0
total       36 1162 0

Nucleic acids
Unit 1 G1 G2 U3 G4 G5 G6 A7 G8 A9 C10 G11 U12 C13 C14 C15 A16 C17 C18
Unit 2 G1 G2 U3 G4 G5 G6 A7 G8 A9 C10 G11 U12 C13 C14 C15 A16 C17 C18

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany