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Sequence, Chains, Asymmetric and Biological Units

Title CONTRIBUTION OF A BURIED HYDROGEN BOND TO HIV-1 ENVELOPE GLY STRUCTURE AND FUNCTION
Keywords HIV-1 ENVELOPE PROTEIN, GP41, MEMBRANE FUSION, HIV-1 ENTRY, PROTEIN
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1F23     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   TRANSMEMBRANE GLYCOPROTEIN  A 74 585 0
2  Protein   TRANSMEMBRANE GLYCOPROTEIN  B 72 570 0
3  Protein   TRANSMEMBRANE GLYCOPROTEIN  C 71 560 0
4  Protein   TRANSMEMBRANE GLYCOPROTEIN  D 75 599 0
5  Protein   TRANSMEMBRANE GLYCOPROTEIN  E 75 590 0
6  Protein   TRANSMEMBRANE GLYCOPROTEIN  F 73 586 0
7 Water     271 0 271
total       711 3490 271

Proteins
Unit 1 SER1 GLY2 ILE3 VAL4 GLN5 GLN6 GLN7 ASN8 ASN9 LEU10 LEU11 ARG12 ALA13 ILE14 GLU15 ALA16 GLN17 GLN18 HIS19 LEU20 LEU21 GLN22 LEU23 THR24 VAL25 TRP26 GLY27 THR28 LYS29 GLN30 LEU31 GLN32 ALA33 ARG34 LEU36 SER37 GLY38 GLY39 ARG40 GLY41 GLY42 TRP43 MET44 GLU45 TRP46 ASP47 ARG48 GLU49 ILE50 ASN51 ASN52 TYR53 THR54 SER55 LEU56 ILE57 HIS58 SER59 LEU60 ILE61 GLU62 GLU63 SER64 GLN65 ASN66 GLN67 GLN68 GLU69 LYS70 ASN71 GLU72 GLN73 GLU74 LEU75
Unit 2 SER1 GLY2 ILE3 VAL4 GLN5 GLN6 GLN7 ASN8 ASN9 LEU10 LEU11 ARG12 ALA13 ILE14 GLU15 ALA16 GLN17 GLN18 HIS19 LEU20 LEU21 GLN22 LEU23 THR24 VAL25 TRP26 GLY27 THR28 LYS29 GLN30 LEU31 GLN32 ALA33 ARG34 ILE35 ARG40 GLY41 GLY42 TRP43 MET44 GLU45 TRP46 ASP47 ARG48 GLU49 ILE50 ASN51 ASN52 TYR53 THR54 SER55 LEU56 ILE57 HIS58 SER59 LEU60 ILE61 GLU62 GLU63 SER64 GLN65 ASN66 GLN67 GLN68 GLU69 LYS70 ASN71 GLU72 GLN73 GLU74 LEU75 LEU76
Unit 3 SER1 GLY2 ILE3 VAL4 GLN5 GLN6 GLN7 ASN8 ASN9 LEU10 LEU11 ARG12 ALA13 ILE14 GLU15 ALA16 GLN17 GLN18 HIS19 LEU20 LEU21 GLN22 LEU23 THR24 VAL25 TRP26 GLY27 THR28 LYS29 GLN30 LEU31 GLN32 ALA33 ARG34 ILE35 ARG40 GLY41 GLY42 TRP43 MET44 GLU45 TRP46 ASP47 ARG48 GLU49 ILE50 ASN51 ASN52 TYR53 THR54 SER55 LEU56 ILE57 HIS58 SER59 LEU60 ILE61 GLU62 GLU63 SER64 GLN65 ASN66 GLN67 GLN68 GLU69 LYS70 ASN71 GLU72 GLN73 GLU74 LEU75
Unit 4 SER1 GLY2 ILE3 VAL4 GLN5 GLN6 GLN7 ASN8 ASN9 LEU10 LEU11 ARG12 ALA13 ILE14 GLU15 ALA16 GLN17 GLN18 HIS19 LEU20 LEU21 GLN22 LEU23 THR24 VAL25 TRP26 GLY27 THR28 LYS29 GLN30 LEU31 GLN32 ALA33 ARG34 ILE35 LEU36 SER37 GLY38 GLY39 ARG40 GLY41 GLY42 TRP43 MET44 GLU45 TRP46 ASP47 ARG48 GLU49 ILE50 ASN51 ASN52 TYR53 THR54 SER55 LEU56 ILE57 HIS58 SER59 LEU60 ILE61 GLU62 GLU63 SER64 GLN65 ASN66 GLN67 GLN68 GLU69 LYS70 ASN71 GLU72 GLN73 GLU74 LEU75
Unit 5 SER1 GLY2 ILE3 VAL4 GLN5 GLN6 GLN7 ASN8 ASN9 LEU10 LEU11 ARG12 ALA13 ILE14 GLU15 ALA16 GLN17 GLN18 HIS19 LEU20 LEU21 GLN22 LEU23 THR24 VAL25 TRP26 GLY27 THR28 LYS29 GLN30 LEU31 GLN32 ALA33 ARG34 ILE35 LEU36 SER37 GLY38 GLY39 ARG40 GLY41 GLY42 TRP43 MET44 GLU45 TRP46 ASP47 ARG48 GLU49 ILE50 ASN51 ASN52 TYR53 THR54 SER55 LEU56 ILE57 HIS58 SER59 LEU60 ILE61 GLU62 GLU63 SER64 GLN65 ASN66 GLN67 GLN68 GLU69 LYS70 ASN71 GLU72 GLN73 GLU74 LEU75
Unit 6 SER1 GLY2 ILE3 VAL4 GLN5 GLN6 GLN7 ASN8 ASN9 LEU10 LEU11 ARG12 ALA13 ILE14 GLU15 ALA16 GLN17 GLN18 HIS19 LEU20 LEU21 GLN22 LEU23 THR24 VAL25 TRP26 GLY27 THR28 LYS29 GLN30 LEU31 GLN32 ALA33 ARG34 ILE35 LEU36 ARG40 GLY41 GLY42 TRP43 MET44 GLU45 TRP46 ASP47 ARG48 GLU49 ILE50 ASN51 ASN52 TYR53 THR54 SER55 LEU56 ILE57 HIS58 SER59 LEU60 ILE61 GLU62 GLU63 SER64 GLN65 ASN66 GLN67 GLN68 GLU69 LYS70 ASN71 GLU72 GLN73 GLU74 LEU75 LEU76

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany