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Sequence, Chains, Asymmetric and Biological Units

Title STRUCTURE OF COENZYME F420 DEPENDENT TETRAHYDROMETHANOPTERIN FROM METHANOBACTERIUM THERMOAUTOTROPHICUM
Keywords (BETA, ALPHA)8 BARREL, TIM BARREL, OXIDOREDUCTASE
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   1F07     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   COENZYME F420-DEPENDENT N5,N10- METHYLENETETRAHYDROMETHANOPTERIN REDUCTASE  A 321 2353 0
2  Protein   COENZYME F420-DEPENDENT N5,N10- METHYLENETETRAHYDROMETHANOPTERIN REDUCTASE  B 321 2821 0
3  Protein   COENZYME F420-DEPENDENT N5,N10- METHYLENETETRAHYDROMETHANOPTERIN REDUCTASE  C 321 2821 0
4  Protein   COENZYME F420-DEPENDENT N5,N10- METHYLENETETRAHYDROMETHANOPTERIN REDUCTASE  D 321 2821 0
5  Ligand   COENZYME F420-DEPENDENT N5,N10- METHYLENETETRAHYDROMETHANOPTERIN REDUCTASE  A 2 0 21
6  Ligand   COENZYME F420-DEPENDENT N5,N10- METHYLENETETRAHYDROMETHANOPTERIN REDUCTASE  B 3 0 22
7  Ligand   COENZYME F420-DEPENDENT N5,N10- METHYLENETETRAHYDROMETHANOPTERIN REDUCTASE  C 3 0 22
8  Ligand   COENZYME F420-DEPENDENT N5,N10- METHYLENETETRAHYDROMETHANOPTERIN REDUCTASE  D 2 0 21
9 Water     505 0 505
total       1799 10816 591
Proteins
Unit 1 MET1 LYS2 PHE3 GLY4 ILE5 GLU6 PHE7 VAL8 PRO9 ASN10 GLU11 PRO12 ILE13 GLU14 LYS15 ILE16 VAL17 LYS18 LEU19 VAL20 LYS21 LEU22 ALA23 GLU24 ASP25 VAL26 GLY27 PHE28 GLU29 TYR30 ALA31 TRP32 ILE33 THR34 ASP35 HIS36 TYR37 ASN38 ASN39 LYS40 ASN41 VAL42 TYR43 GLU44 THR45 LEU46 ALA47 LEU48 ILE49 ALA50 GLU51 GLY52 THR53 GLU54 THR55 ILE56 LYS57 LEU58 GLY59 PRO60 GLY61 VAL62 THR63 ASN64 PRO65 TYR66 VAL67 ARG68 SER69 PRO70 ALA71 ILE72 THR73 ALA74 SER75 ALA76 ILE77 ALA78 THR79 LEU80 ASP81 GLU82 LEU83 SER84 ASN85 GLY86 ARG87 ALA88 THR89 LEU90 GLY91 ILE92 GLY93 PRO94 GLY95 ASP96 LYS97 ALA98 THR99 PHE100 ASP101 ALA102 LEU103 GLY104 ILE105 GLU106 TRP107 VAL108 LYS109 PRO110 VAL111 SER112 THR113 ILE114 ARG115 ASP116 ALA117 ILE118 ALA119 MET120 MET121 ARG122 THR123 LEU124 LEU125 ALA126 GLY127 GLU128 LYS129 THR130 GLU131 SER132 GLY133 ALA134 GLN135 LEU136 MET137 GLY138 VAL139 LYS140 ALA141 VAL142 GLN143 GLU144 LYS145 ILE146 PRO147 ILE148 TYR149 MET150 GLY151 ALA152 GLN153 GLY154 PRO155 MET156 MET157 LEU158 LYS159 THR160 ALA161 GLY162 GLU163 ILE164 SER165 ASP166 GLY167 ALA168 LEU169 ILE170 ASN171 ALA172 SER173 ASN174 PRO175 LYS176 ASP177 PHE178 GLU179 ALA180 ALA181 VAL182 PRO183 LEU184 ILE185 LYS186 GLU187 GLY188 ALA189 GLU190 ALA191 ALA192 GLY193 LYS194 SER195 ILE196 ALA197 ASP198 ILE199 ASP200 VAL201 ALA202 ALA203 TYR204 THR205 CYS206 CYS207 SER208 ILE209 ASP210 GLU211 ASP212 ALA213 ALA214 ALA215 ALA216 ALA217 ASN218 ALA219 ALA220 LYS221 ILE222 VAL223 VAL224 ALA225 PHE226 ILE227 ALA228 ALA229 GLY230 SER231 PRO232 PRO233 PRO234 VAL235 PHE236 GLU237 ARG238 HIS239 GLY240 LEU241 PRO242 ALA243 ASP244 THR245 GLY246 LYS247 LYS248 PHE249 GLY250 GLU251 LEU252 LEU253 GLY254 LYS255 GLY256 ASP257 PHE258 GLY259 GLY260 ALA261 ILE262 GLY263 ALA264 VAL265 ASP266 ASP267 ALA268 LEU269 MET270 GLU271 ALA272 PHE273 SER274 VAL275 VAL276 GLY277 THR278 PRO279 ASP280 GLU281 PHE282 ILE283 PRO284 LYS285 ILE286 GLU287 ALA288 LEU289 GLY290 GLU291 MET292 GLY293 VAL294 THR295 GLN296 TYR297 VAL298 ALA299 GLY300 SER301 PRO302 ILE303 GLY304 PRO305 ASP306 LYS307 GLU308 LYS309 SER310 ILE311 LYS312 LEU313 LEU314 GLY315 GLU316 VAL317 ILE318 ALA319 SER320 PHE321
Unit 2 MET1001 LYS1002 PHE1003 GLY1004 ILE1005 GLU1006 PHE1007 VAL1008 PRO1009 ASN1010 GLU1011 PRO1012 ILE1013 GLU1014 LYS1015 ILE1016 VAL1017 LYS1018 LEU1019 VAL1020 LYS1021 LEU1022 ALA1023 GLU1024 ASP1025 VAL1026 GLY1027 PHE1028 GLU1029 TYR1030 ALA1031 TRP1032 ILE1033 THR1034 ASP1035 HIS1036 TYR1037 ASN1038 ASN1039 LYS1040 ASN1041 VAL1042 TYR1043 GLU1044 THR1045 LEU1046 ALA1047 LEU1048 ILE1049 ALA1050 GLU1051 GLY1052 THR1053 GLU1054 THR1055 ILE1056 LYS1057 LEU1058 GLY1059 PRO1060 GLY1061 VAL1062 THR1063 ASN1064 PRO1065 TYR1066 VAL1067 ARG1068 SER1069 PRO1070 ALA1071 ILE1072 THR1073 ALA1074 SER1075 ALA1076 ILE1077 ALA1078 THR1079 LEU1080 ASP1081 GLU1082 LEU1083 SER1084 ASN1085 GLY1086 ARG1087 ALA1088 THR1089 LEU1090 GLY1091 ILE1092 GLY1093 PRO1094 GLY1095 ASP1096 LYS1097 ALA1098 THR1099 PHE1100 ASP1101 ALA1102 LEU1103 GLY1104 ILE1105 GLU1106 TRP1107 VAL1108 LYS1109 PRO1110 VAL1111 SER1112 THR1113 ILE1114 ARG1115 ASP1116 ALA1117 ILE1118 ALA1119 MET1120 MET1121 ARG1122 THR1123 LEU1124 LEU1125 ALA1126 GLY1127 GLU1128 LYS1129 THR1130 GLU1131 SER1132 GLY1133 ALA1134 GLN1135 LEU1136 MET1137 GLY1138 VAL1139 LYS1140 ALA1141 VAL1142 GLN1143 GLU1144 LYS1145 ILE1146 PRO1147 ILE1148 TYR1149 MET1150 GLY1151 ALA1152 GLN1153 GLY1154 PRO1155 MET1156 MET1157 LEU1158 LYS1159 THR1160 ALA1161 GLY1162 GLU1163 ILE1164 SER1165 ASP1166 GLY1167 ALA1168 LEU1169 ILE1170 ASN1171 ALA1172 SER1173 ASN1174 PRO1175 LYS1176 ASP1177 PHE1178 GLU1179 ALA1180 ALA1181 VAL1182 PRO1183 LEU1184 ILE1185 LYS1186 GLU1187 GLY1188 ALA1189 GLU1190 ALA1191 ALA1192 GLY1193 LYS1194 SER1195 ILE1196 ALA1197 ASP1198 ILE1199 ASP1200 VAL1201 ALA1202 ALA1203 TYR1204 THR1205 CYS1206 CYS1207 SER1208 ILE1209 ASP1210 GLU1211 ASP1212 ALA1213 ALA1214 ALA1215 ALA1216 ALA1217 ASN1218 ALA1219 ALA1220 LYS1221 ILE1222 VAL1223 VAL1224 ALA1225 PHE1226 ILE1227 ALA1228 ALA1229 GLY1230 SER1231 PRO1232 PRO1233 PRO1234 VAL1235 PHE1236 GLU1237 ARG1238 HIS1239 GLY1240 LEU1241 PRO1242 ALA1243 ASP1244 THR1245 GLY1246 LYS1247 LYS1248 PHE1249 GLY1250 GLU1251 LEU1252 LEU1253 GLY1254 LYS1255 GLY1256 ASP1257 PHE1258 GLY1259 GLY1260 ALA1261 ILE1262 GLY1263 ALA1264 VAL1265 ASP1266 ASP1267 ALA1268 LEU1269 MET1270 GLU1271 ALA1272 PHE1273 SER1274 VAL1275 VAL1276 GLY1277 THR1278 PRO1279 ASP1280 GLU1281 PHE1282 ILE1283 PRO1284 LYS1285 ILE1286 GLU1287 ALA1288 LEU1289 GLY1290 GLU1291 MET1292 GLY1293 VAL1294 THR1295 GLN1296 TYR1297 VAL1298 ALA1299 GLY1300 SER1301 PRO1302 ILE1303 GLY1304 PRO1305 ASP1306 LYS1307 GLU1308 LYS1309 SER1310 ILE1311 LYS1312 LEU1313 LEU1314 GLY1315 GLU1316 VAL1317 ILE1318 ALA1319 SER1320 PHE1321
Unit 3 MET2001 LYS2002 PHE2003 GLY2004 ILE2005 GLU2006 PHE2007 VAL2008 PRO2009 ASN2010 GLU2011 PRO2012 ILE2013 GLU2014 LYS2015 ILE2016 VAL2017 LYS2018 LEU2019 VAL2020 LYS2021 LEU2022 ALA2023 GLU2024 ASP2025 VAL2026 GLY2027 PHE2028 GLU2029 TYR2030 ALA2031 TRP2032 ILE2033 THR2034 ASP2035 HIS2036 TYR2037 ASN2038 ASN2039 LYS2040 ASN2041 VAL2042 TYR2043 GLU2044 THR2045 LEU2046 ALA2047 LEU2048 ILE2049 ALA2050 GLU2051 GLY2052 THR2053 GLU2054 THR2055 ILE2056 LYS2057 LEU2058 GLY2059 PRO2060 GLY2061 VAL2062 THR2063 ASN2064 PRO2065 TYR2066 VAL2067 ARG2068 SER2069 PRO2070 ALA2071 ILE2072 THR2073 ALA2074 SER2075 ALA2076 ILE2077 ALA2078 THR2079 LEU2080 ASP2081 GLU2082 LEU2083 SER2084 ASN2085 GLY2086 ARG2087 ALA2088 THR2089 LEU2090 GLY2091 ILE2092 GLY2093 PRO2094 GLY2095 ASP2096 LYS2097 ALA2098 THR2099 PHE2100 ASP2101 ALA2102 LEU2103 GLY2104 ILE2105 GLU2106 TRP2107 VAL2108 LYS2109 PRO2110 VAL2111 SER2112 THR2113 ILE2114 ARG2115 ASP2116 ALA2117 ILE2118 ALA2119 MET2120 MET2121 ARG2122 THR2123 LEU2124 LEU2125 ALA2126 GLY2127 GLU2128 LYS2129 THR2130 GLU2131 SER2132 GLY2133 ALA2134 GLN2135 LEU2136 MET2137 GLY2138 VAL2139 LYS2140 ALA2141 VAL2142 GLN2143 GLU2144 LYS2145 ILE2146 PRO2147 ILE2148 TYR2149 MET2150 GLY2151 ALA2152 GLN2153 GLY2154 PRO2155 MET2156 MET2157 LEU2158 LYS2159 THR2160 ALA2161 GLY2162 GLU2163 ILE2164 SER2165 ASP2166 GLY2167 ALA2168 LEU2169 ILE2170 ASN2171 ALA2172 SER2173 ASN2174 PRO2175 LYS2176 ASP2177 PHE2178 GLU2179 ALA2180 ALA2181 VAL2182 PRO2183 LEU2184 ILE2185 LYS2186 GLU2187 GLY2188 ALA2189 GLU2190 ALA2191 ALA2192 GLY2193 LYS2194 SER2195 ILE2196 ALA2197 ASP2198 ILE2199 ASP2200 VAL2201 ALA2202 ALA2203 TYR2204 THR2205 CYS2206 CYS2207 SER2208 ILE2209 ASP2210 GLU2211 ASP2212 ALA2213 ALA2214 ALA2215 ALA2216 ALA2217 ASN2218 ALA2219 ALA2220 LYS2221 ILE2222 VAL2223 VAL2224 ALA2225 PHE2226 ILE2227 ALA2228 ALA2229 GLY2230 SER2231 PRO2232 PRO2233 PRO2234 VAL2235 PHE2236 GLU2237 ARG2238 HIS2239 GLY2240 LEU2241 PRO2242 ALA2243 ASP2244 THR2245 GLY2246 LYS2247 LYS2248 PHE2249 GLY2250 GLU2251 LEU2252 LEU2253 GLY2254 LYS2255 GLY2256 ASP2257 PHE2258 GLY2259 GLY2260 ALA2261 ILE2262 GLY2263 ALA2264 VAL2265 ASP2266 ASP2267 ALA2268 LEU2269 MET2270 GLU2271 ALA2272 PHE2273 SER2274 VAL2275 VAL2276 GLY2277 THR2278 PRO2279 ASP2280 GLU2281 PHE2282 ILE2283 PRO2284 LYS2285 ILE2286 GLU2287 ALA2288 LEU2289 GLY2290 GLU2291 MET2292 GLY2293 VAL2294 THR2295 GLN2296 TYR2297 VAL2298 ALA2299 GLY2300 SER2301 PRO2302 ILE2303 GLY2304 PRO2305 ASP2306 LYS2307 GLU2308 LYS2309 SER2310 ILE2311 LYS2312 LEU2313 LEU2314 GLY2315 GLU2316 VAL2317 ILE2318 ALA2319 SER2320 PHE2321
Unit 4 MET3001 LYS3002 PHE3003 GLY3004 ILE3005 GLU3006 PHE3007 VAL3008 PRO3009 ASN3010 GLU3011 PRO3012 ILE3013 GLU3014 LYS3015 ILE3016 VAL3017 LYS3018 LEU3019 VAL3020 LYS3021 LEU3022 ALA3023 GLU3024 ASP3025 VAL3026 GLY3027 PHE3028 GLU3029 TYR3030 ALA3031 TRP3032 ILE3033 THR3034 ASP3035 HIS3036 TYR3037 ASN3038 ASN3039 LYS3040 ASN3041 VAL3042 TYR3043 GLU3044 THR3045 LEU3046 ALA3047 LEU3048 ILE3049 ALA3050 GLU3051 GLY3052 THR3053 GLU3054 THR3055 ILE3056 LYS3057 LEU3058 GLY3059 PRO3060 GLY3061 VAL3062 THR3063 ASN3064 PRO3065 TYR3066 VAL3067 ARG3068 SER3069 PRO3070 ALA3071 ILE3072 THR3073 ALA3074 SER3075 ALA3076 ILE3077 ALA3078 THR3079 LEU3080 ASP3081 GLU3082 LEU3083 SER3084 ASN3085 GLY3086 ARG3087 ALA3088 THR3089 LEU3090 GLY3091 ILE3092 GLY3093 PRO3094 GLY3095 ASP3096 LYS3097 ALA3098 THR3099 PHE3100 ASP3101 ALA3102 LEU3103 GLY3104 ILE3105 GLU3106 TRP3107 VAL3108 LYS3109 PRO3110 VAL3111 SER3112 THR3113 ILE3114 ARG3115 ASP3116 ALA3117 ILE3118 ALA3119 MET3120 MET3121 ARG3122 THR3123 LEU3124 LEU3125 ALA3126 GLY3127 GLU3128 LYS3129 THR3130 GLU3131 SER3132 GLY3133 ALA3134 GLN3135 LEU3136 MET3137 GLY3138 VAL3139 LYS3140 ALA3141 VAL3142 GLN3143 GLU3144 LYS3145 ILE3146 PRO3147 ILE3148 TYR3149 MET3150 GLY3151 ALA3152 GLN3153 GLY3154 PRO3155 MET3156 MET3157 LEU3158 LYS3159 THR3160 ALA3161 GLY3162 GLU3163 ILE3164 SER3165 ASP3166 GLY3167 ALA3168 LEU3169 ILE3170 ASN3171 ALA3172 SER3173 ASN3174 PRO3175 LYS3176 ASP3177 PHE3178 GLU3179 ALA3180 ALA3181 VAL3182 PRO3183 LEU3184 ILE3185 LYS3186 GLU3187 GLY3188 ALA3189 GLU3190 ALA3191 ALA3192 GLY3193 LYS3194 SER3195 ILE3196 ALA3197 ASP3198 ILE3199 ASP3200 VAL3201 ALA3202 ALA3203 TYR3204 THR3205 CYS3206 CYS3207 SER3208 ILE3209 ASP3210 GLU3211 ASP3212 ALA3213 ALA3214 ALA3215 ALA3216 ALA3217 ASN3218 ALA3219 ALA3220 LYS3221 ILE3222 VAL3223 VAL3224 ALA3225 PHE3226 ILE3227 ALA3228 ALA3229 GLY3230 SER3231 PRO3232 PRO3233 PRO3234 VAL3235 PHE3236 GLU3237 ARG3238 HIS3239 GLY3240 LEU3241 PRO3242 ALA3243 ASP3244 THR3245 GLY3246 LYS3247 LYS3248 PHE3249 GLY3250 GLU3251 LEU3252 LEU3253 GLY3254 LYS3255 GLY3256 ASP3257 PHE3258 GLY3259 GLY3260 ALA3261 ILE3262 GLY3263 ALA3264 VAL3265 ASP3266 ASP3267 ALA3268 LEU3269 MET3270 GLU3271 ALA3272 PHE3273 SER3274 VAL3275 VAL3276 GLY3277 THR3278 PRO3279 ASP3280 GLU3281 PHE3282 ILE3283 PRO3284 LYS3285 ILE3286 GLU3287 ALA3288 LEU3289 GLY3290 GLU3291 MET3292 GLY3293 VAL3294 THR3295 GLN3296 TYR3297 VAL3298 ALA3299 GLY3300 SER3301 PRO3302 ILE3303 GLY3304 PRO3305 ASP3306 LYS3307 GLU3308 LYS3309 SER3310 ILE3311 LYS3312 LEU3313 LEU3314 GLY3315 GLU3316 VAL3317 ILE3318 ALA3319 SER3320 PHE3321
Ligands
Unit 5 MPO331 MPD335
Unit 6 CL324 MPO332 MPD336
Unit 7 CL323 MPO333 MPD337
Unit 8 MPO334 MPD338
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany