1F06 - Sequence, Chains, Asymmetric and Biological Units

• Title: THREE DIMENSIONAL STRUCTURE OF THE TERNARY COMPLEX OF CORYNE GLUTAMICUM DIAMINOPIMELATE DEHYDROGENASE NADPH-L-2-AMINO-6- PIMELATE
• Keywords: ENZYME-NADPH-INHIBITOR TERNARY COMPLEX, OXIDOREDUCTASE
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	1F06	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	MESO-DIAMINOPIMELATE D-DEHYDROGENASE	A	320	2475	0
2	Protein	MESO-DIAMINOPIMELATE D-DEHYDROGENASE	B	320	2475	0
3	Ligand	MESO-DIAMINOPIMELATE D-DEHYDROGENASE	A	1	0	48
4	Ligand	MESO-DIAMINOPIMELATE D-DEHYDROGENASE	B	2	0	61
5	Water			116	0	116
total				759	4950	225

Proteins

Unit 1

MET 1 THR 2 ASN 3 ILE 4 ARG 5 VAL 6 ALA 7 ILE 8 VAL 9 GLY 10 TYR 11 GLY 12 ASN 13 LEU 14 GLY 15 ARG 16 SER 17 VAL 18 GLU 19 LYS 20 LEU 21 ILE 22 ALA 23 LYS 24 GLN 25 PRO 26 ASP 27 MET 28 ASP 29 LEU 30 VAL 31 GLY 32 ILE 33 PHE 34 SER 35 ARG 36 ARG 37 ALA 38 THR 39 LEU 40 ASP 41 THR 42 LYS 43 THR 44 PRO 45 VAL 46 PHE 47 ASP 48 VAL 49 ALA 50 ASP 51 VAL 52 ASP 53 LYS 54 HIS 55 ALA 56 ASP 57 ASP 58 VAL 59 ASP 60 VAL 61 LEU 62 PHE 63 LEU 64 CYS 65 MET 66 GLY 67 SER 68 ALA 69 THR 70 ASP 71 ILE 72 PRO 73 GLU 74 GLN 75 ALA 76 PRO 77 LYS 78 PHE 79 ALA 80 GLN 81 PHE 82 ALA 83 CYS 84 THR 85 VAL 86 ASP 87 THR 88 TYR 89 ASP 90 ASN 91 HIS 92 ARG 93 ASP 94 ILE 95 PRO 96 ARG 97 HIS 98 ARG 99 GLN 100 VAL 101 MET 102 ASN 103 GLU 104 ALA 105 ALA 106 THR 107 ALA 108 ALA 109 GLY 110 ASN 111 VAL 112 ALA 113 LEU 114 VAL 115 SER 116 THR 117 GLY 118 TRP 119 ASP 120 PRO 121 GLY 122 MET 123 PHE 124 SER 125 ILE 126 ASN 127 ARG 128 VAL 129 TYR 130 ALA 131 ALA 132 ALA 133 VAL 134 LEU 135 ALA 136 GLU 137 HIS 138 GLN 139 GLN 140 HIS 141 THR 142 PHE 143 TRP 144 GLY 145 PRO 146 GLY 147 LEU 148 SER 149 GLN 150 GLY 151 HIS 152 SER 153 ASP 154 ALA 155 LEU 156 ARG 157 ARG 158 ILE 159 PRO 160 GLY 161 VAL 162 GLN 163 LYS 164 ALA 165 VAL 166 GLN 167 TYR 168 THR 169 LEU 170 PRO 171 SER 172 GLU 173 ASP 174 ALA 175 LEU 176 GLU 177 LYS 178 ALA 179 ARG 180 ARG 181 GLY 182 GLU 183 ALA 184 GLY 185 ASP 186 LEU 187 THR 188 GLY 189 LYS 190 GLN 191 THR 192 HIS 193 LYS 194 ARG 195 GLN 196 CYS 197 PHE 198 VAL 199 VAL 200 ALA 201 ASP 202 ALA 203 ALA 204 ASP 205 HIS 206 GLU 207 ARG 208 ILE 209 GLU 210 ASN 211 ASP 212 ILE 213 ARG 214 THR 215 MET 216 PRO 217 ASP 218 TYR 219 PHE 220 VAL 221 GLY 222 TYR 223 GLU 224 VAL 225 GLU 226 VAL 227 ASN 228 PHE 229 ILE 230 ASP 231 GLU 232 ALA 233 THR 234 PHE 235 ASP 236 SER 237 GLU 238 HIS 239 THR 240 GLY 241 MET 242 PRO 243 HIS 244 GLY 245 GLY 246 HIS 247 VAL 248 ILE 249 THR 250 THR 251 GLY 252 ASP 253 THR 254 GLY 255 GLY 256 PHE 257 ASN 258 HIS 259 THR 260 VAL 261 GLU 262 TYR 263 ILE 264 LEU 265 LYS 266 LEU 267 ASP 268 ARG 269 ASN 270 PRO 271 ASP 272 PHE 273 THR 274 ALA 275 SER 276 SER 277 GLN 278 ILE 279 ALA 280 PHE 281 GLY 282 ARG 283 ALA 284 ALA 285 HIS 286 ARG 287 MET 288 LYS 289 GLN 290 GLN 291 GLY 292 GLN 293 SER 294 GLY 295 ALA 296 PHE 297 THR 298 VAL 299 LEU 300 GLU 301 VAL 302 ALA 303 PRO 304 TYR 305 LEU 306 LEU 307 SER 308 PRO 309 GLU 310 ASN 311 LEU 312 ASP 313 ASP 314 LEU 315 ILE 316 ALA 317 ARG 318 ASP 319 VAL 320

Unit 2

MET 501 THR 502 ASN 503 ILE 504 ARG 505 VAL 506 ALA 507 ILE 508 VAL 509 GLY 510 TYR 511 GLY 512 ASN 513 LEU 514 GLY 515 ARG 516 SER 517 VAL 518 GLU 519 LYS 520 LEU 521 ILE 522 ALA 523 LYS 524 GLN 525 PRO 526 ASP 527 MET 528 ASP 529 LEU 530 VAL 531 GLY 532 ILE 533 PHE 534 SER 535 ARG 536 ARG 537 ALA 538 THR 539 LEU 540 ASP 541 THR 542 LYS 543 THR 544 PRO 545 VAL 546 PHE 547 ASP 548 VAL 549 ALA 550 ASP 551 VAL 552 ASP 553 LYS 554 HIS 555 ALA 556 ASP 557 ASP 558 VAL 559 ASP 560 VAL 561 LEU 562 PHE 563 LEU 564 CYS 565 MET 566 GLY 567 SER 568 ALA 569 THR 570 ASP 571 ILE 572 PRO 573 GLU 574 GLN 575 ALA 576 PRO 577 LYS 578 PHE 579 ALA 580 GLN 581 PHE 582 ALA 583 CYS 584 THR 585 VAL 586 ASP 587 THR 588 TYR 589 ASP 590 ASN 591 HIS 592 ARG 593 ASP 594 ILE 595 PRO 596 ARG 597 HIS 598 ARG 599 GLN 600 VAL 601 MET 602 ASN 603 GLU 604 ALA 605 ALA 606 THR 607 ALA 608 ALA 609 GLY 610 ASN 611 VAL 612 ALA 613 LEU 614 VAL 615 SER 616 THR 617 GLY 618 TRP 619 ASP 620 PRO 621 GLY 622 MET 623 PHE 624 SER 625 ILE 626 ASN 627 ARG 628 VAL 629 TYR 630 ALA 631 ALA 632 ALA 633 VAL 634 LEU 635 ALA 636 GLU 637 HIS 638 GLN 639 GLN 640 HIS 641 THR 642 PHE 643 TRP 644 GLY 645 PRO 646 GLY 647 LEU 648 SER 649 GLN 650 GLY 651 HIS 652 SER 653 ASP 654 ALA 655 LEU 656 ARG 657 ARG 658 ILE 659 PRO 660 GLY 661 VAL 662 GLN 663 LYS 664 ALA 665 VAL 666 GLN 667 TYR 668 THR 669 LEU 670 PRO 671 SER 672 GLU 673 ASP 674 ALA 675 LEU 676 GLU 677 LYS 678 ALA 679 ARG 680 ARG 681 GLY 682 GLU 683 ALA 684 GLY 685 ASP 686 LEU 687 THR 688 GLY 689 LYS 690 GLN 691 THR 692 HIS 693 LYS 694 ARG 695 GLN 696 CYS 697 PHE 698 VAL 699 VAL 700 ALA 701 ASP 702 ALA 703 ALA 704 ASP 705 HIS 706 GLU 707 ARG 708 ILE 709 GLU 710 ASN 711 ASP 712 ILE 713 ARG 714 THR 715 MET 716 PRO 717 ASP 718 TYR 719 PHE 720 VAL 721 GLY 722 TYR 723 GLU 724 VAL 725 GLU 726 VAL 727 ASN 728 PHE 729 ILE 730 ASP 731 GLU 732 ALA 733 THR 734 PHE 735 ASP 736 SER 737 GLU 738 HIS 739 THR 740 GLY 741 MET 742 PRO 743 HIS 744 GLY 745 GLY 746 HIS 747 VAL 748 ILE 749 THR 750 THR 751 GLY 752 ASP 753 THR 754 GLY 755 GLY 756 PHE 757 ASN 758 HIS 759 THR 760 VAL 761 GLU 762 TYR 763 ILE 764 LEU 765 LYS 766 LEU 767 ASP 768 ARG 769 ASN 770 PRO 771 ASP 772 PHE 773 THR 774 ALA 775 SER 776 SER 777 GLN 778 ILE 779 ALA 780 PHE 781 GLY 782 ARG 783 ALA 784 ALA 785 HIS 786 ARG 787 MET 788 LYS 789 GLN 790 GLN 791 GLY 792 GLN 793 SER 794 GLY 795 ALA 796 PHE 797 THR 798 VAL 799 LEU 800 GLU 801 VAL 802 ALA 803 PRO 804 TYR 805 LEU 806 LEU 807 SER 808 PRO 809 GLU 810 ASN 811 LEU 812 ASP 813 ASP 814 LEU 815 ILE 816 ALA 817 ARG 818 ASP 819 VAL 820

Ligands

Unit 3	NDP 401
Unit 4	NDP 901 2NP 950