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Sequence, Chains, Asymmetric and Biological Units

Title SOLUTION STRUCTURE OF HTLV-1 PEPTIDE BOUND TO ITS RNA APTAMER TARGET
Keywords ARGININE-GUANINE SANDWICH, EXTENDED BOUND BASIC REX PEPTIDE, FLAP BASE, JUNCTIONAL BASE TRIPLETS, RNA BINDING POCKET ARCHITECTURE, RNA BINDING PROTEIN/RNA COMPLEX
Experiment NMR
Number of Models  12


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1EXY     released     available     available     Quaternary Structure Server  
NDB   1EXY                         


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  RNA    A 33 1066 0
2  Protein   HTLV-1 REX PEPTIDE  B 16 316 0
total       49 1382 0

Proteins
Unit 2 MET101 PRO102 LYS103 THR104 ARG105 ARG106 ARG107 PRO108 ARG109 ARG110 SER111 GLN112 ARG113 LYS114 ARG115 PRO116

Nucleic acids
Unit 1 G1 G2 G3 C4 G5 C6 C7 G8 G9 U10 A11 C12 G13 C14 A15 A16 G17 U18 A19 C20 G21 A22 C23 G24 G25 U26 A27 C28 G29 C30 U31 C32 C33

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany