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Title | NMR AND MOLECULAR MODELING REVEAL THAT DIFFERENT HYDROGEN BONDING PATTERNS ARE POSSIBLE FOR GU PAIRS: ONE HYDROGEN BOND FOR EACH GU PAIR IN R(GGCGUGCC)2 AND TWO FOR EACH GU PAIR IN R(GAGUGCUC)2 | |
Keywords | RNA, GU PAIR, HYDROGEN BOND, DOUBLE HELIX | |
Experiment | NMR | |
Number of Models | 1 |
Database | ID code | Status | Coordinate files | ||
Header | Asymmetric unit | Biological unit | |||
PDB | 1EKD | released | available | available | Quaternary Structure Server |
NDB | 1EKD | ||||
Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
---|---|---|---|---|---|---|
1 | RNA | A | 8 | 258 | 0 | |
2 | RNA | B | 8 | 258 | 0 | |
total | 16 | 516 | 0 |
Unit 1 | G1 G2 C3 G4 U5 G6 C7 C8 |
Unit 2 | G1 G2 C3 G4 U5 G6 C7 C8 |
Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.
Perl script: | PDBscan.pl (15 Sep 2016) |
Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |