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Sequence, Chains, Asymmetric and Biological Units

Title CATALYTIC DOMAIN OF PROMMP-2 E404Q MUTANT
Keywords HYDROLASE-HYDROLASE INHIBITOR COMPLEX, HYDROLYSE, MATRIX METALLOPROTEINASE, GELATINASE A, HYDROLASE- HYDROLASE INHIB COMPLEX
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   1EAK     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   72 KDA TYPE IV COLLAGENASE  A 421 3330 0
2  Protein   72 KDA TYPE IV COLLAGENASE  B 419 3313 0
3  Protein   72 KDA TYPE IV COLLAGENASE  C 418 3305 0
4  Protein   72 KDA TYPE IV COLLAGENASE  D 419 3313 0
5  Protein   INHIBITOR PEPTIDE  P 8 44 0
6  Protein   INHIBITOR PEPTIDE  R 8 44 0
7  Ligand   72 KDA TYPE IV COLLAGENASE  A 5 0 9
8  Ligand   72 KDA TYPE IV COLLAGENASE  B 6 0 14
9  Ligand   72 KDA TYPE IV COLLAGENASE  C 6 0 14
10  Ligand   72 KDA TYPE IV COLLAGENASE  D 5 0 9
11 Water     109 0 109
total       1824 13349 155
Proteins
Unit 1 SER32 PRO33 ILE34 ILE35 LYS36 PHE37 PRO38 GLY39 ASP40 VAL41 ALA42 PRO43 LYS44 THR45 ASP46 LYS47 GLU48 LEU49 ALA50 VAL51 GLN52 TYR53 LEU54 ASN55 THR56 PHE57 TYR58 GLY59 CYS60 PRO61 LYS62 GLU63 SER64 CYS65 ASN66 LEU67 PHE68 VAL69 LEU70 LYS71 ASP72 THR73 LEU74 LYS75 LYS76 MET77 GLN78 LYS79 PHE80 PHE81 GLY82 LEU83 PRO84 GLN85 THR86 GLY87 ASP88 LEU89 ASP90 GLN91 ASN92 THR93 ILE94 GLU95 THR96 MET97 ARG98 LYS99 PRO100 ARG101 CYS102 GLY103 ASN104 PRO105 ASP106 VAL107 ALA108 ASN109 TYR110 ASN111 PHE112 PHE113 PRO114 ARG115 LYS116 PRO117 LYS118 TRP119 ASP120 LYS121 ASN122 GLN123 ILE124 THR125 TYR126 ARG127 ILE128 ILE129 GLY130 TYR131 THR132 PRO133 ASP134 LEU135 ASP136 PRO137 GLU138 THR139 VAL140 ASP141 ASP142 ALA143 PHE144 ALA145 ARG146 ALA147 PHE148 GLN149 VAL150 TRP151 SER152 ASP153 VAL154 THR155 PRO156 LEU157 ARG158 PHE159 SER160 ARG161 ILE162 HIS163 ASP164 GLY165 GLU166 ALA167 ASP168 ILE169 MET170 ILE171 ASN172 PHE173 GLY174 ARG175 TRP176 GLU177 HIS178 GLY179 ASP180 GLY181 TYR182 PRO183 PHE184 ASP185 GLY186 LYS187 ASP188 GLY189 LEU190 LEU191 ALA192 HIS193 ALA194 PHE195 ALA196 PRO197 GLY198 THR199 GLY200 VAL201 GLY202 GLY203 ASP204 SER205 HIS206 PHE207 ASP208 ASP209 ASP210 GLU211 LEU212 TRP213 THR214 LEU215 GLY216 GLU217 GLY218 GLN219 VAL220 VAL221 ARG222 VAL223 LYS224 TYR225 GLY226 ASN227 ALA228 ASP229 GLY230 GLU231 TYR232 CYS233 LYS234 PHE235 PRO236 PHE237 LEU238 PHE239 ASN240 GLY241 LYS242 GLU243 TYR244 ASN245 SER246 CYS247 THR248 ASP249 THR250 GLY251 ARG252 SER253 ASP254 GLY255 PHE256 LEU257 TRP258 CYS259 SER260 THR261 THR262 TYR263 ASN264 PHE265 GLU266 LYS267 ASP268 GLY269 LYS270 TYR271 GLY272 PHE273 CYS274 PRO275 HIS276 GLU277 ALA278 LEU279 PHE280 THR281 MET282 GLY283 GLY284 ASN285 ALA286 GLU287 GLY288 GLN289 PRO290 CYS291 LYS292 PHE293 PRO294 PHE295 ARG296 PHE297 GLN298 GLY299 THR300 SER301 TYR302 ASP303 SER304 CYS305 THR306 THR307 GLU308 GLY309 ARG310 THR311 ASP312 GLY313 TYR314 ARG315 TRP316 CYS317 GLY318 THR319 THR320 GLU321 ASP322 TYR323 ASP324 ARG325 ASP326 LYS327 LYS328 TYR329 GLY330 PHE331 CYS332 PRO333 GLU334 THR335 ALA336 MET337 SER338 THR339 VAL340 GLY341 GLY342 ASN343 SER344 GLU345 GLY346 ALA347 PRO348 CYS349 VAL350 PHE351 PRO352 PHE353 THR354 PHE355 LEU356 GLY357 ASN358 LYS359 TYR360 GLU361 SER362 CYS363 THR364 SER365 ALA366 GLY367 ARG368 SER369 ASP370 GLY371 LYS372 MET373 TRP374 CYS375 ALA376 THR377 THR378 ALA379 ASN380 TYR381 ASP382 ASP383 ASP384 ARG385 LYS386 TRP387 GLY388 PHE389 CYS390 PRO391 ASP392 GLN393 GLY394 TYR395 SER396 LEU397 PHE398 LEU399 VAL400 ALA401 ALA402 HIS403 GLN404 PHE405 GLY406 HIS407 ALA408 MET409 GLY410 LEU411 GLU412 HIS413 SER414 GLN415 ASP416 PRO417 GLY418 ALA419 LEU420 MET421 ALA422 PRO423 ILE424 TYR425 THR426 TYR427 THR428 LYS429 ASN430 PHE431 ARG432 LEU433 SER434 GLN435 ASP436 ASP437 ILE438 LYS439 GLY440 ILE441 GLN442 GLU443 LEU444 TYR445 GLY446 ALA447 SER448 PRO449 ASP450 ILE451 ASP452
Unit 2 SER32 PRO33 ILE34 ILE35 LYS36 PHE37 PRO38 GLY39 ASP40 VAL41 ALA42 PRO43 LYS44 THR45 ASP46 LYS47 GLU48 LEU49 ALA50 VAL51 GLN52 TYR53 LEU54 ASN55 THR56 PHE57 TYR58 GLY59 CYS60 PRO61 LYS62 GLU63 SER64 CYS65 ASN66 LEU67 PHE68 VAL69 LEU70 LYS71 ASP72 THR73 LEU74 LYS75 LYS76 MET77 GLN78 LYS79 PHE80 PHE81 GLY82 LEU83 PRO84 GLN85 THR86 GLY87 ASP88 LEU89 ASP90 GLN91 ASN92 THR93 ILE94 GLU95 THR96 MET97 ARG98 LYS99 PRO100 ARG101 CYS102 GLY103 ASN104 PRO105 ASP106 VAL107 ALA108 ASN109 TYR110 ASN111 PHE112 PHE113 PRO114 ARG115 LYS116 PRO117 LYS118 TRP119 ASP120 LYS121 ASN122 GLN123 ILE124 THR125 TYR126 ARG127 ILE128 ILE129 GLY130 TYR131 THR132 PRO133 ASP134 LEU135 ASP136 PRO137 GLU138 THR139 VAL140 ASP141 ASP142 ALA143 PHE144 ALA145 ARG146 ALA147 PHE148 GLN149 VAL150 TRP151 SER152 ASP153 VAL154 THR155 PRO156 LEU157 ARG158 PHE159 SER160 ARG161 ILE162 HIS163 ASP164 GLY165 GLU166 ALA167 ASP168 ILE169 MET170 ILE171 ASN172 PHE173 GLY174 ARG175 TRP176 GLU177 HIS178 GLY179 ASP180 GLY181 TYR182 PRO183 PHE184 ASP185 GLY186 LYS187 ASP188 GLY189 LEU190 LEU191 ALA192 HIS193 ALA194 PHE195 ALA196 PRO197 GLY198 THR199 GLY200 VAL201 GLY202 GLY203 ASP204 SER205 HIS206 PHE207 ASP208 ASP209 ASP210 GLU211 LEU212 TRP213 THR214 LEU215 GLY216 GLU217 GLY218 GLN219 VAL220 VAL221 ARG222 VAL223 LYS224 TYR225 GLY226 ASN227 ALA228 ASP229 GLY230 GLU231 TYR232 CYS233 LYS234 PHE235 PRO236 PHE237 LEU238 PHE239 ASN240 GLY241 LYS242 GLU243 TYR244 ASN245 SER246 CYS247 THR248 ASP249 THR250 GLY251 ARG252 SER253 ASP254 GLY255 PHE256 LEU257 TRP258 CYS259 SER260 THR261 THR262 TYR263 ASN264 PHE265 GLU266 LYS267 ASP268 GLY269 LYS270 TYR271 GLY272 PHE273 CYS274 PRO275 HIS276 GLU277 ALA278 LEU279 PHE280 THR281 MET282 GLY283 GLY284 ASN285 ALA286 GLU287 GLY288 GLN289 PRO290 CYS291 LYS292 PHE293 PRO294 PHE295 ARG296 PHE297 GLN298 GLY299 THR300 SER301 TYR302 ASP303 SER304 CYS305 THR306 THR307 GLU308 GLY309 ARG310 THR311 ASP312 GLY313 TYR314 ARG315 TRP316 CYS317 GLY318 THR319 THR320 GLU321 ASP322 TYR323 ASP324 ARG325 ASP326 LYS327 LYS328 TYR329 GLY330 PHE331 CYS332 PRO333 GLU334 THR335 ALA336 MET337 SER338 THR339 VAL340 GLY341 GLY342 ASN343 SER344 GLU345 GLY346 ALA347 PRO348 CYS349 VAL350 PHE351 PRO352 PHE353 THR354 PHE355 LEU356 GLY357 ASN358 LYS359 TYR360 GLU361 SER362 CYS363 THR364 SER365 ALA366 GLY367 ARG368 SER369 ASP370 GLY371 LYS372 MET373 TRP374 CYS375 ALA376 THR377 THR378 ALA379 ASN380 TYR381 ASP382 ASP383 ASP384 ARG385 LYS386 TRP387 GLY388 PHE389 CYS390 PRO391 ASP392 GLN393 GLY394 TYR395 SER396 LEU397 PHE398 LEU399 VAL400 ALA401 ALA402 HIS403 GLN404 PHE405 GLY406 HIS407 ALA408 MET409 GLY410 LEU411 GLU412 HIS413 SER414 GLN415 ASP416 PRO417 GLY418 ALA419 LEU420 MET421 ALA422 PRO423 ILE424 TYR425 THR426 TYR427 THR428 LYS429 ASN430 PHE431 ARG432 LEU433 SER434 GLN435 ASP436 ASP437 ILE438 LYS439 GLY440 ILE441 GLN442 GLU443 LEU444 TYR445 GLY446 ALA447 SER448 PRO449 ASP450
Unit 3 SER32 PRO33 ILE34 ILE35 LYS36 PHE37 PRO38 GLY39 ASP40 VAL41 ALA42 PRO43 LYS44 THR45 ASP46 LYS47 GLU48 LEU49 ALA50 VAL51 GLN52 TYR53 LEU54 ASN55 THR56 PHE57 TYR58 GLY59 CYS60 PRO61 LYS62 GLU63 SER64 CYS65 ASN66 LEU67 PHE68 VAL69 LEU70 LYS71 ASP72 THR73 LEU74 LYS75 LYS76 MET77 GLN78 LYS79 PHE80 PHE81 GLY82 LEU83 PRO84 GLN85 THR86 GLY87 ASP88 LEU89 ASP90 GLN91 ASN92 THR93 ILE94 GLU95 THR96 MET97 ARG98 LYS99 PRO100 ARG101 CYS102 GLY103 ASN104 PRO105 ASP106 VAL107 ALA108 ASN109 TYR110 ASN111 PHE112 PHE113 PRO114 ARG115 LYS116 PRO117 LYS118 TRP119 ASP120 LYS121 ASN122 GLN123 ILE124 THR125 TYR126 ARG127 ILE128 ILE129 GLY130 TYR131 THR132 PRO133 ASP134 LEU135 ASP136 PRO137 GLU138 THR139 VAL140 ASP141 ASP142 ALA143 PHE144 ALA145 ARG146 ALA147 PHE148 GLN149 VAL150 TRP151 SER152 ASP153 VAL154 THR155 PRO156 LEU157 ARG158 PHE159 SER160 ARG161 ILE162 HIS163 ASP164 GLY165 GLU166 ALA167 ASP168 ILE169 MET170 ILE171 ASN172 PHE173 GLY174 ARG175 TRP176 GLU177 HIS178 GLY179 ASP180 GLY181 TYR182 PRO183 PHE184 ASP185 GLY186 LYS187 ASP188 GLY189 LEU190 LEU191 ALA192 HIS193 ALA194 PHE195 ALA196 PRO197 GLY198 THR199 GLY200 VAL201 GLY202 GLY203 ASP204 SER205 HIS206 PHE207 ASP208 ASP209 ASP210 GLU211 LEU212 TRP213 THR214 LEU215 GLY216 GLU217 GLY218 GLN219 VAL220 VAL221 ARG222 VAL223 LYS224 TYR225 GLY226 ASN227 ALA228 ASP229 GLY230 GLU231 TYR232 CYS233 LYS234 PHE235 PRO236 PHE237 LEU238 PHE239 ASN240 GLY241 LYS242 GLU243 TYR244 ASN245 SER246 CYS247 THR248 ASP249 THR250 GLY251 ARG252 SER253 ASP254 GLY255 PHE256 LEU257 TRP258 CYS259 SER260 THR261 THR262 TYR263 ASN264 PHE265 GLU266 LYS267 ASP268 GLY269 LYS270 TYR271 GLY272 PHE273 CYS274 PRO275 HIS276 GLU277 ALA278 LEU279 PHE280 THR281 MET282 GLY283 GLY284 ASN285 ALA286 GLU287 GLY288 GLN289 PRO290 CYS291 LYS292 PHE293 PRO294 PHE295 ARG296 PHE297 GLN298 GLY299 THR300 SER301 TYR302 ASP303 SER304 CYS305 THR306 THR307 GLU308 GLY309 ARG310 THR311 ASP312 GLY313 TYR314 ARG315 TRP316 CYS317 GLY318 THR319 THR320 GLU321 ASP322 TYR323 ASP324 ARG325 ASP326 LYS327 LYS328 TYR329 GLY330 PHE331 CYS332 PRO333 GLU334 THR335 ALA336 MET337 SER338 THR339 VAL340 GLY341 GLY342 ASN343 SER344 GLU345 GLY346 ALA347 PRO348 CYS349 VAL350 PHE351 PRO352 PHE353 THR354 PHE355 LEU356 GLY357 ASN358 LYS359 TYR360 GLU361 SER362 CYS363 THR364 SER365 ALA366 GLY367 ARG368 SER369 ASP370 GLY371 LYS372 MET373 TRP374 CYS375 ALA376 THR377 THR378 ALA379 ASN380 TYR381 ASP382 ASP383 ASP384 ARG385 LYS386 TRP387 GLY388 PHE389 CYS390 PRO391 ASP392 GLN393 GLY394 TYR395 SER396 LEU397 PHE398 LEU399 VAL400 ALA401 ALA402 HIS403 GLN404 PHE405 GLY406 HIS407 ALA408 MET409 GLY410 LEU411 GLU412 HIS413 SER414 GLN415 ASP416 PRO417 GLY418 ALA419 LEU420 MET421 ALA422 PRO423 ILE424 TYR425 THR426 TYR427 THR428 LYS429 ASN430 PHE431 ARG432 LEU433 SER434 GLN435 ASP436 ASP437 ILE438 LYS439 GLY440 ILE441 GLN442 GLU443 LEU444 TYR445 GLY446 ALA447 SER448 PRO449
Unit 4 SER32 PRO33 ILE34 ILE35 LYS36 PHE37 PRO38 GLY39 ASP40 VAL41 ALA42 PRO43 LYS44 THR45 ASP46 LYS47 GLU48 LEU49 ALA50 VAL51 GLN52 TYR53 LEU54 ASN55 THR56 PHE57 TYR58 GLY59 CYS60 PRO61 LYS62 GLU63 SER64 CYS65 ASN66 LEU67 PHE68 VAL69 LEU70 LYS71 ASP72 THR73 LEU74 LYS75 LYS76 MET77 GLN78 LYS79 PHE80 PHE81 GLY82 LEU83 PRO84 GLN85 THR86 GLY87 ASP88 LEU89 ASP90 GLN91 ASN92 THR93 ILE94 GLU95 THR96 MET97 ARG98 LYS99 PRO100 ARG101 CYS102 GLY103 ASN104 PRO105 ASP106 VAL107 ALA108 ASN109 TYR110 ASN111 PHE112 PHE113 PRO114 ARG115 LYS116 PRO117 LYS118 TRP119 ASP120 LYS121 ASN122 GLN123 ILE124 THR125 TYR126 ARG127 ILE128 ILE129 GLY130 TYR131 THR132 PRO133 ASP134 LEU135 ASP136 PRO137 GLU138 THR139 VAL140 ASP141 ASP142 ALA143 PHE144 ALA145 ARG146 ALA147 PHE148 GLN149 VAL150 TRP151 SER152 ASP153 VAL154 THR155 PRO156 LEU157 ARG158 PHE159 SER160 ARG161 ILE162 HIS163 ASP164 GLY165 GLU166 ALA167 ASP168 ILE169 MET170 ILE171 ASN172 PHE173 GLY174 ARG175 TRP176 GLU177 HIS178 GLY179 ASP180 GLY181 TYR182 PRO183 PHE184 ASP185 GLY186 LYS187 ASP188 GLY189 LEU190 LEU191 ALA192 HIS193 ALA194 PHE195 ALA196 PRO197 GLY198 THR199 GLY200 VAL201 GLY202 GLY203 ASP204 SER205 HIS206 PHE207 ASP208 ASP209 ASP210 GLU211 LEU212 TRP213 THR214 LEU215 GLY216 GLU217 GLY218 GLN219 VAL220 VAL221 ARG222 VAL223 LYS224 TYR225 GLY226 ASN227 ALA228 ASP229 GLY230 GLU231 TYR232 CYS233 LYS234 PHE235 PRO236 PHE237 LEU238 PHE239 ASN240 GLY241 LYS242 GLU243 TYR244 ASN245 SER246 CYS247 THR248 ASP249 THR250 GLY251 ARG252 SER253 ASP254 GLY255 PHE256 LEU257 TRP258 CYS259 SER260 THR261 THR262 TYR263 ASN264 PHE265 GLU266 LYS267 ASP268 GLY269 LYS270 TYR271 GLY272 PHE273 CYS274 PRO275 HIS276 GLU277 ALA278 LEU279 PHE280 THR281 MET282 GLY283 GLY284 ASN285 ALA286 GLU287 GLY288 GLN289 PRO290 CYS291 LYS292 PHE293 PRO294 PHE295 ARG296 PHE297 GLN298 GLY299 THR300 SER301 TYR302 ASP303 SER304 CYS305 THR306 THR307 GLU308 GLY309 ARG310 THR311 ASP312 GLY313 TYR314 ARG315 TRP316 CYS317 GLY318 THR319 THR320 GLU321 ASP322 TYR323 ASP324 ARG325 ASP326 LYS327 LYS328 TYR329 GLY330 PHE331 CYS332 PRO333 GLU334 THR335 ALA336 MET337 SER338 THR339 VAL340 GLY341 GLY342 ASN343 SER344 GLU345 GLY346 ALA347 PRO348 CYS349 VAL350 PHE351 PRO352 PHE353 THR354 PHE355 LEU356 GLY357 ASN358 LYS359 TYR360 GLU361 SER362 CYS363 THR364 SER365 ALA366 GLY367 ARG368 SER369 ASP370 GLY371 LYS372 MET373 TRP374 CYS375 ALA376 THR377 THR378 ALA379 ASN380 TYR381 ASP382 ASP383 ASP384 ARG385 LYS386 TRP387 GLY388 PHE389 CYS390 PRO391 ASP392 GLN393 GLY394 TYR395 SER396 LEU397 PHE398 LEU399 VAL400 ALA401 ALA402 HIS403 GLN404 PHE405 GLY406 HIS407 ALA408 MET409 GLY410 LEU411 GLU412 HIS413 SER414 GLN415 ASP416 PRO417 GLY418 ALA419 LEU420 MET421 ALA422 PRO423 ILE424 TYR425 THR426 TYR427 THR428 LYS429 ASN430 PHE431 ARG432 LEU433 SER434 GLN435 ASP436 ASP437 ILE438 LYS439 GLY440 ILE441 GLN442 GLU443 LEU444 TYR445 GLY446 ALA447 SER448 PRO449 ASP450
Unit 5 GLY746 PRO747 ALA748 GLY749 PRO750 PRO751 GLY752 ALA753
Unit 6 GLY746 PRO747 ALA748 GLY749 PRO750 PRO751 GLY752 ALA753
Ligands
Unit 7 SO4851 ZN996 ZN997 CA998 CA999
Unit 8 SO4852 SO4853 ZN996 ZN997 CA998 CA999
Unit 9 SO4850 SO4856 ZN996 ZN997 CA998 CA999
Unit 10 SO4857 ZN996 ZN997 CA998 CA999
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany