1E5F - Sequence, Chains, Asymmetric and Biological Units

• Title: METHIONINE GAMMA-LYASE (MGL) FROM TRICHOMONAS VAGINALIS
• Keywords: METHIONINE BIOSYNTHESIS, PLP-DEPENDENT ENZYMES, C-S GAMMA LYASE, LYASE
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	1E5F	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	METHIONINE GAMMA-LYASE	A	393	2953	0
2	Protein	METHIONINE GAMMA-LYASE	B	393	2956	0
3	Ligand	METHIONINE GAMMA-LYASE	A	5	0	36
4	Ligand	METHIONINE GAMMA-LYASE	B	4	0	30
5	Water			645	0	645
total				1440	5909	711

Proteins

Unit 1

GLU 4 ARG 5 MET 6 THR 7 PRO 8 ALA 9 THR 10 ALA 11 CYS 12 ILE 13 HIS 14 ALA 15 ASN 16 PRO 17 GLN 18 LYS 19 ASP 20 GLN 21 PHE 22 GLY 23 ALA 24 ALA 25 ILE 26 PRO 27 PRO 28 ILE 29 TYR 30 GLN 31 THR 32 SER 33 THR 34 PHE 35 VAL 36 PHE 37 ASP 38 ASN 39 CYS 40 GLN 41 GLN 42 GLY 43 GLY 44 ASN 45 ARG 46 PHE 47 ALA 48 GLY 49 GLN 50 GLU 51 SER 52 GLY 53 TYR 54 ILE 55 TYR 56 THR 57 ARG 58 LEU 59 GLY 60 ASN 61 PRO 62 THR 63 VAL 64 SER 65 ASN 66 LEU 67 GLU 68 GLY 69 LYS 70 ILE 71 ALA 72 PHE 73 LEU 74 GLU 75 LYS 76 THR 77 GLU 78 ALA 79 CYS 80 VAL 81 ALA 82 THR 83 SER 84 SER 85 GLY 86 MET 87 GLY 88 ALA 89 ILE 90 ALA 91 ALA 92 THR 93 VAL 94 LEU 95 THR 96 ILE 97 LEU 98 LYS 99 ALA 100 GLY 101 ASP 102 HIS 103 LEU 104 ILE 105 SER 106 ASP 107 GLU 108 CYS 109 LEU 110 TYR 111 GLY 112 CYS 113 THR 114 HIS 115 ALA 116 LEU 117 PHE 118 GLU 119 HIS 120 ALA 121 LEU 122 THR 123 LYS 124 PHE 125 GLY 126 ILE 127 GLN 128 VAL 129 ASP 130 PHE 131 ILE 132 ASN 133 THR 134 ALA 135 ILE 136 PRO 137 GLY 138 GLU 139 VAL 140 LYS 141 LYS 142 HIS 143 MET 144 LYS 145 PRO 146 ASN 147 THR 148 LYS 149 ILE 150 VAL 151 TYR 152 PHE 153 GLU 154 THR 155 PRO 156 ALA 157 ASN 158 PRO 159 THR 160 LEU 161 LYS 162 ILE 163 ILE 164 ASP 165 MET 166 GLU 167 ARG 168 VAL 169 CYS 170 LYS 171 ASP 172 ALA 173 HIS 174 SER 175 GLN 176 GLU 177 GLY 178 VAL 179 LEU 180 VAL 181 ILE 182 ALA 183 ASP 184 ASN 185 THR 186 PHE 187 CYS 188 SER 189 PRO 190 MET 191 ILE 192 THR 193 ASN 194 PRO 195 VAL 196 ASP 197 PHE 198 GLY 199 VAL 200 ASP 201 VAL 202 VAL 203 VAL 204 HIS 205 SER 206 ALA 207 THR 208 LYS 209 TYR 210 ILE 211 ASN 212 GLY 213 HIS 214 THR 215 ASP 216 VAL 217 VAL 218 ALA 219 GLY 220 LEU 221 ILE 222 CYS 223 GLY 224 LYS 225 ALA 226 ASP 227 LEU 228 LEU 229 GLN 230 GLN 231 ILE 232 ARG 233 MET 234 VAL 235 GLY 236 ILE 237 LYS 238 ASP 239 ILE 240 THR 241 GLY 242 SER 243 VAL 244 ILE 245 SER 246 PRO 247 HIS 248 ASP 249 ALA 250 TRP 251 LEU 252 ILE 253 THR 254 ARG 255 GLY 256 LEU 257 SER 258 THR 259 LEU 260 ASN 261 ILE 262 ARG 263 MET 264 LYS 265 ALA 266 GLU 267 SER 268 GLU 269 ASN 270 ALA 271 MET 272 LYS 273 VAL 274 ALA 275 GLU 276 TYR 277 LEU 278 LYS 279 SER 280 HIS 281 PRO 282 ALA 283 VAL 284 GLU 285 LYS 286 VAL 287 TYR 288 TYR 289 PRO 290 GLY 291 PHE 292 GLU 293 ASP 294 HIS 295 GLU 296 GLY 297 HIS 298 ASP 299 ILE 300 ALA 301 LYS 302 LYS 303 GLN 304 MET 305 ARG 306 MET 307 TYR 308 GLY 309 SER 310 MET 311 ILE 312 THR 313 PHE 314 ILE 315 LEU 316 LYS 317 SER 318 GLY 319 PHE 320 GLU 321 GLY 322 ALA 323 LYS 324 LYS 325 LEU 326 LEU 327 ASP 328 ASN 329 LEU 330 LYS 331 LEU 332 ILE 333 THR 334 LEU 335 ALA 336 VAL 337 SER 338 LEU 339 GLY 340 GLY 341 CYS 342 GLU 343 SER 344 LEU 345 ILE 346 GLN 347 HIS 348 PRO 349 ALA 350 SER 351 MET 352 THR 353 HIS 354 ALA 355 VAL 356 VAL 357 PRO 358 LYS 359 GLU 360 GLU 361 ARG 362 GLU 363 ALA 364 ALA 365 GLY 366 ILE 367 THR 368 ASP 369 GLY 370 MET 371 ILE 372 ARG 373 LEU 374 SER 375 VAL 376 GLY 377 ILE 378 GLU 379 ASP 380 ALA 381 ASP 382 GLU 383 LEU 384 ILE 385 ALA 386 ASP 387 PHE 388 LYS 389 GLN 390 GLY 391 LEU 392 ASP 393 ALA 394 LEU 395 LEU 396

Unit 2

GLU 4 ARG 5 MET 6 THR 7 PRO 8 ALA 9 THR 10 ALA 11 CYS 12 ILE 13 HIS 14 ALA 15 ASN 16 PRO 17 GLN 18 LYS 19 ASP 20 GLN 21 PHE 22 GLY 23 ALA 24 ALA 25 ILE 26 PRO 27 PRO 28 ILE 29 TYR 30 GLN 31 THR 32 SER 33 THR 34 PHE 35 VAL 36 PHE 37 ASP 38 ASN 39 CYS 40 GLN 41 GLN 42 GLY 43 GLY 44 ASN 45 ARG 46 PHE 47 ALA 48 GLY 49 GLN 50 GLU 51 SER 52 GLY 53 TYR 54 ILE 55 TYR 56 THR 57 ARG 58 LEU 59 GLY 60 ASN 61 PRO 62 THR 63 VAL 64 SER 65 ASN 66 LEU 67 GLU 68 GLY 69 LYS 70 ILE 71 ALA 72 PHE 73 LEU 74 GLU 75 LYS 76 THR 77 GLU 78 ALA 79 CYS 80 VAL 81 ALA 82 THR 83 SER 84 SER 85 GLY 86 MET 87 GLY 88 ALA 89 ILE 90 ALA 91 ALA 92 THR 93 VAL 94 LEU 95 THR 96 ILE 97 LEU 98 LYS 99 ALA 100 GLY 101 ASP 102 HIS 103 LEU 104 ILE 105 SER 106 ASP 107 GLU 108 CYS 109 LEU 110 TYR 111 GLY 112 CYS 113 THR 114 HIS 115 ALA 116 LEU 117 PHE 118 GLU 119 HIS 120 ALA 121 LEU 122 THR 123 LYS 124 PHE 125 GLY 126 ILE 127 GLN 128 VAL 129 ASP 130 PHE 131 ILE 132 ASN 133 THR 134 ALA 135 ILE 136 PRO 137 GLY 138 GLU 139 VAL 140 LYS 141 LYS 142 HIS 143 MET 144 LYS 145 PRO 146 ASN 147 THR 148 LYS 149 ILE 150 VAL 151 TYR 152 PHE 153 GLU 154 THR 155 PRO 156 ALA 157 ASN 158 PRO 159 THR 160 LEU 161 LYS 162 ILE 163 ILE 164 ASP 165 MET 166 GLU 167 ARG 168 VAL 169 CYS 170 LYS 171 ASP 172 ALA 173 HIS 174 SER 175 GLN 176 GLU 177 GLY 178 VAL 179 LEU 180 VAL 181 ILE 182 ALA 183 ASP 184 ASN 185 THR 186 PHE 187 CYS 188 SER 189 PRO 190 MET 191 ILE 192 THR 193 ASN 194 PRO 195 VAL 196 ASP 197 PHE 198 GLY 199 VAL 200 ASP 201 VAL 202 VAL 203 VAL 204 HIS 205 SER 206 ALA 207 THR 208 LYS 209 TYR 210 ILE 211 ASN 212 GLY 213 HIS 214 THR 215 ASP 216 VAL 217 VAL 218 ALA 219 GLY 220 LEU 221 ILE 222 CYS 223 GLY 224 LYS 225 ALA 226 ASP 227 LEU 228 LEU 229 GLN 230 GLN 231 ILE 232 ARG 233 MET 234 VAL 235 GLY 236 ILE 237 LYS 238 ASP 239 ILE 240 THR 241 GLY 242 SER 243 VAL 244 ILE 245 SER 246 PRO 247 HIS 248 ASP 249 ALA 250 TRP 251 LEU 252 ILE 253 THR 254 ARG 255 GLY 256 LEU 257 SER 258 THR 259 LEU 260 ASN 261 ILE 262 ARG 263 MET 264 LYS 265 ALA 266 GLU 267 SER 268 GLU 269 ASN 270 ALA 271 MET 272 LYS 273 VAL 274 ALA 275 GLU 276 TYR 277 LEU 278 LYS 279 SER 280 HIS 281 PRO 282 ALA 283 VAL 284 GLU 285 LYS 286 VAL 287 TYR 288 TYR 289 PRO 290 GLY 291 PHE 292 GLU 293 ASP 294 HIS 295 GLU 296 GLY 297 HIS 298 ASP 299 ILE 300 ALA 301 LYS 302 LYS 303 GLN 304 MET 305 ARG 306 MET 307 TYR 308 GLY 309 SER 310 MET 311 ILE 312 THR 313 PHE 314 ILE 315 LEU 316 LYS 317 SER 318 GLY 319 PHE 320 GLU 321 GLY 322 ALA 323 LYS 324 LYS 325 LEU 326 LEU 327 ASP 328 ASN 329 LEU 330 LYS 331 LEU 332 ILE 333 THR 334 LEU 335 ALA 336 VAL 337 SER 338 LEU 339 GLY 340 GLY 341 CYS 342 GLU 343 SER 344 LEU 345 ILE 346 GLN 347 HIS 348 PRO 349 ALA 350 SER 351 MET 352 THR 353 HIS 354 ALA 355 VAL 356 VAL 357 PRO 358 LYS 359 GLU 360 GLU 361 ARG 362 GLU 363 ALA 364 ALA 365 GLY 366 ILE 367 THR 368 ASP 369 GLY 370 MET 371 ILE 372 ARG 373 LEU 374 SER 375 VAL 376 GLY 377 ILE 378 GLU 379 ASP 380 ALA 381 ASP 382 GLU 383 LEU 384 ILE 385 ALA 386 ASP 387 PHE 388 LYS 389 GLN 390 GLY 391 LEU 392 ASP 393 ALA 394 LEU 395 LEU 396

Ligands

Unit 3	PLP 405 SO4 407 SO4 408 SO4 409 GOL 412
Unit 4	PLP 405 SO4 406 SO4 410 SO4 411