1DBT - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF OROTIDINE 5'-MONOPHOSPHATE DECARBOXYLASE FROM BACILLUS SUBTILIS COMPLEXED WITH UMP
• Keywords: DECARBOXYLASE, UMP, TIM BARREL, LYASE
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	1DBT	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	OROTIDINE 5'-PHOSPHATE DECARBOXYLASE	A	237	1807	0
2	Protein	OROTIDINE 5'-PHOSPHATE DECARBOXYLASE	B	234	1782	0
3	Protein	OROTIDINE 5'-PHOSPHATE DECARBOXYLASE	C	234	1782	0
4	Ligand	OROTIDINE 5'-PHOSPHATE DECARBOXYLASE	A	1	0	21
5	Ligand	OROTIDINE 5'-PHOSPHATE DECARBOXYLASE	B	1	0	21
6	Ligand	OROTIDINE 5'-PHOSPHATE DECARBOXYLASE	C	1	0	21
7	Water			226	0	226
total				934	5371	289

Proteins

Unit 1	MET 1 LYS 2 ASN 3 ASN 4 LEU 5 PRO 6 ILE 7 ILE 8 ALA 9 LEU 10 ASP 11 PHE 12 ALA 13 SER 14 ALA 15 GLU 16 GLU 17 THR 18 LEU 19 ALA 20 PHE 21 LEU 22 ALA 23 PRO 24 PHE 25 GLN 26 GLN 27 GLU 28 PRO 29 LEU 30 PHE 31 VAL 32 LYS 33 VAL 34 GLY 35 MET 36 GLU 37 LEU 38 PHE 39 TYR 40 GLN 41 GLU 42 GLY 43 PRO 44 SER 45 ILE 46 VAL 47 LYS 48 GLN 49 LEU 50 LYS 51 GLU 52 ARG 53 ASN 54 CYS 55 GLU 56 LEU 57 PHE 58 LEU 59 ASP 60 LEU 61 LYS 62 LEU 63 HIS 64 ASP 65 ILE 66 PRO 67 THR 68 THR 69 VAL 70 ASN 71 LYS 72 ALA 73 MET 74 LYS 75 ARG 76 LEU 77 ALA 78 SER 79 LEU 80 GLY 81 VAL 82 ASP 83 LEU 84 VAL 85 ASN 86 VAL 87 HIS 88 ALA 89 ALA 90 GLY 91 GLY 92 LYS 93 LYS 94 MET 95 MET 96 GLN 97 ALA 98 ALA 99 LEU 100 GLU 101 GLY 102 LEU 103 GLU 104 GLU 105 GLY 106 THR 107 PRO 108 ALA 109 GLY 110 LYS 111 LYS 112 ARG 113 PRO 114 SER 115 LEU 116 ILE 117 ALA 118 VAL 119 THR 120 GLN 121 LEU 122 THR 123 SER 124 THR 125 SER 126 GLU 127 GLN 128 ILE 129 MET 130 LYS 131 ASP 132 GLU 133 LEU 134 LEU 135 ILE 136 GLU 137 LYS 138 SER 139 LEU 140 ILE 141 ASP 142 THR 143 VAL 144 VAL 145 HIS 146 TYR 147 SER 148 LYS 149 GLN 150 ALA 151 GLU 152 GLU 153 SER 154 GLY 155 LEU 156 ASP 157 GLY 158 VAL 159 VAL 160 CYS 161 SER 162 VAL 163 HIS 164 GLU 165 ALA 166 LYS 167 ALA 168 ILE 169 TYR 170 GLN 171 ALA 172 VAL 173 SER 174 PRO 175 SER 176 PHE 177 LEU 178 THR 179 VAL 180 THR 181 PRO 182 GLY 183 ILE 184 ARG 185 MET 186 SER 187 GLU 188 ASP 189 ALA 190 ALA 191 ASN 192 ASP 193 GLN 194 VAL 195 ARG 196 VAL 197 ALA 198 THR 199 PRO 200 ALA 201 ILE 202 ALA 203 ARG 204 GLU 205 LYS 206 GLY 207 SER 208 SER 209 ALA 210 ILE 211 VAL 212 VAL 213 GLY 214 ARG 215 SER 216 ILE 217 THR 218 LYS 219 ALA 220 GLU 221 ASP 222 PRO 223 VAL 224 LYS 225 ALA 226 TYR 227 LYS 228 ALA 229 VAL 230 ARG 231 LEU 232 GLU 233 TRP 234 GLU 235 GLY 236 ILE 237
Unit 2	ASN 3 ASN 4 LEU 5 PRO 6 ILE 7 ILE 8 ALA 9 LEU 10 ASP 11 PHE 12 ALA 13 SER 14 ALA 15 GLU 16 GLU 17 THR 18 LEU 19 ALA 20 PHE 21 LEU 22 ALA 23 PRO 24 PHE 25 GLN 26 GLN 27 GLU 28 PRO 29 LEU 30 PHE 31 VAL 32 LYS 33 VAL 34 GLY 35 MET 36 GLU 37 LEU 38 PHE 39 TYR 40 GLN 41 GLU 42 GLY 43 PRO 44 SER 45 ILE 46 VAL 47 LYS 48 GLN 49 LEU 50 LYS 51 GLU 52 ARG 53 ASN 54 CYS 55 GLU 56 LEU 57 PHE 58 LEU 59 ASP 60 LEU 61 LYS 62 LEU 63 HIS 64 ASP 65 ILE 66 PRO 67 THR 68 THR 69 VAL 70 ASN 71 LYS 72 ALA 73 MET 74 LYS 75 ARG 76 LEU 77 ALA 78 SER 79 LEU 80 GLY 81 VAL 82 ASP 83 LEU 84 VAL 85 ASN 86 VAL 87 HIS 88 ALA 89 ALA 90 GLY 91 GLY 92 LYS 93 LYS 94 MET 95 MET 96 GLN 97 ALA 98 ALA 99 LEU 100 GLU 101 GLY 102 LEU 103 GLU 104 GLU 105 GLY 106 THR 107 PRO 108 ALA 109 GLY 110 LYS 111 LYS 112 ARG 113 PRO 114 SER 115 LEU 116 ILE 117 ALA 118 VAL 119 THR 120 GLN 121 LEU 122 THR 123 SER 124 THR 125 SER 126 GLU 127 GLN 128 ILE 129 MET 130 LYS 131 ASP 132 GLU 133 LEU 134 LEU 135 ILE 136 GLU 137 LYS 138 SER 139 LEU 140 ILE 141 ASP 142 THR 143 VAL 144 VAL 145 HIS 146 TYR 147 SER 148 LYS 149 GLN 150 ALA 151 GLU 152 GLU 153 SER 154 GLY 155 LEU 156 ASP 157 GLY 158 VAL 159 VAL 160 CYS 161 SER 162 VAL 163 HIS 164 GLU 165 ALA 166 LYS 167 ALA 168 ILE 169 TYR 170 GLN 171 ALA 172 VAL 173 SER 174 PRO 175 SER 176 PHE 177 LEU 178 THR 179 VAL 180 THR 181 PRO 182 GLY 183 ILE 184 ARG 185 MET 186 SER 187 GLU 188 ASP 189 ALA 190 ALA 191 ASN 192 ASP 193 GLN 194 VAL 195 ARG 196 VAL 197 ALA 198 THR 199 PRO 200 ALA 201 ILE 202 ALA 203 ARG 204 GLU 205 LYS 206 GLY 207 SER 208 SER 209 ALA 210 ILE 211 VAL 212 VAL 213 GLY 214 ARG 215 SER 216 ILE 217 THR 218 LYS 219 ALA 220 GLU 221 ASP 222 PRO 223 VAL 224 LYS 225 ALA 226 TYR 227 LYS 228 ALA 229 VAL 230 ARG 231 LEU 232 GLU 233 TRP 234 GLU 235 GLY 236
Unit 3	ASN 3 ASN 4 LEU 5 PRO 6 ILE 7 ILE 8 ALA 9 LEU 10 ASP 11 PHE 12 ALA 13 SER 14 ALA 15 GLU 16 GLU 17 THR 18 LEU 19 ALA 20 PHE 21 LEU 22 ALA 23 PRO 24 PHE 25 GLN 26 GLN 27 GLU 28 PRO 29 LEU 30 PHE 31 VAL 32 LYS 33 VAL 34 GLY 35 MET 36 GLU 37 LEU 38 PHE 39 TYR 40 GLN 41 GLU 42 GLY 43 PRO 44 SER 45 ILE 46 VAL 47 LYS 48 GLN 49 LEU 50 LYS 51 GLU 52 ARG 53 ASN 54 CYS 55 GLU 56 LEU 57 PHE 58 LEU 59 ASP 60 LEU 61 LYS 62 LEU 63 HIS 64 ASP 65 ILE 66 PRO 67 THR 68 THR 69 VAL 70 ASN 71 LYS 72 ALA 73 MET 74 LYS 75 ARG 76 LEU 77 ALA 78 SER 79 LEU 80 GLY 81 VAL 82 ASP 83 LEU 84 VAL 85 ASN 86 VAL 87 HIS 88 ALA 89 ALA 90 GLY 91 GLY 92 LYS 93 LYS 94 MET 95 MET 96 GLN 97 ALA 98 ALA 99 LEU 100 GLU 101 GLY 102 LEU 103 GLU 104 GLU 105 GLY 106 THR 107 PRO 108 ALA 109 GLY 110 LYS 111 LYS 112 ARG 113 PRO 114 SER 115 LEU 116 ILE 117 ALA 118 VAL 119 THR 120 GLN 121 LEU 122 THR 123 SER 124 THR 125 SER 126 GLU 127 GLN 128 ILE 129 MET 130 LYS 131 ASP 132 GLU 133 LEU 134 LEU 135 ILE 136 GLU 137 LYS 138 SER 139 LEU 140 ILE 141 ASP 142 THR 143 VAL 144 VAL 145 HIS 146 TYR 147 SER 148 LYS 149 GLN 150 ALA 151 GLU 152 GLU 153 SER 154 GLY 155 LEU 156 ASP 157 GLY 158 VAL 159 VAL 160 CYS 161 SER 162 VAL 163 HIS 164 GLU 165 ALA 166 LYS 167 ALA 168 ILE 169 TYR 170 GLN 171 ALA 172 VAL 173 SER 174 PRO 175 SER 176 PHE 177 LEU 178 THR 179 VAL 180 THR 181 PRO 182 GLY 183 ILE 184 ARG 185 MET 186 SER 187 GLU 188 ASP 189 ALA 190 ALA 191 ASN 192 ASP 193 GLN 194 VAL 195 ARG 196 VAL 197 ALA 198 THR 199 PRO 200 ALA 201 ILE 202 ALA 203 ARG 204 GLU 205 LYS 206 GLY 207 SER 208 SER 209 ALA 210 ILE 211 VAL 212 VAL 213 GLY 214 ARG 215 SER 216 ILE 217 THR 218 LYS 219 ALA 220 GLU 221 ASP 222 PRO 223 VAL 224 LYS 225 ALA 226 TYR 227 LYS 228 ALA 229 VAL 230 ARG 231 LEU 232 GLU 233 TRP 234 GLU 235 GLY 236

Ligands

Unit 4	U5P 250
Unit 5	U5P 251
Unit 6	U5P 252