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Sequence, Chains, Asymmetric and Biological Units

Title X-RAY CRYSTAL STRUCTURE OF YEAST RNA TRIPHOSPHATASE IN COMPL SULFATE AND MANGANESE IONS.
Keywords RNA TRIPHOSPHATASE, BETA SUBUNIT, POLYNUCLEOTIDE 5'-TRIPHOSP MRNA PROCESSING, MRNA CAPPING, NUCLEAR PROTEIN BETA BARREL, CATALYTIC DOMAIN, DIMER, MANGANESE-SULFATE COMPLEX, HYDROLA
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   1D8H     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   MRNA TRIPHOSPHATASE CET1  A 288 2313 0
2  Protein   MRNA TRIPHOSPHATASE CET1  B 288 2313 0
3  Protein   MRNA TRIPHOSPHATASE CET1  C 288 2313 0
4  Ligand   MRNA TRIPHOSPHATASE CET1  A 2 0 6
5  Ligand   MRNA TRIPHOSPHATASE CET1  B 2 0 6
6  Ligand   MRNA TRIPHOSPHATASE CET1  C 2 0 6
7 Water     669 0 669
total       1539 6939 687
Proteins
Unit 1 HIS239 MET240 TYR241 ARG242 ASN243 VAL244 PRO245 ILE246 TRP247 ALA248 GLN249 LYS250 TRP251 LYS252 PRO253 THR254 ILE255 LYS256 ALA257 LEU258 GLN259 SER260 ILE261 ASN262 VAL263 LYS264 ASP265 LEU266 LYS267 ILE268 ASP269 PRO270 SER271 PHE272 LEU273 ASN274 ILE275 ILE276 PRO277 ASP278 ASP279 ASP280 LEU281 THR282 LYS283 SER284 VAL285 GLN286 ASP287 TRP288 VAL289 TYR290 ALA291 THR292 ILE293 TYR294 SER295 ILE296 ALA297 PRO298 GLU299 LEU300 ARG301 SER302 PHE303 ILE304 GLU305 LEU306 GLU307 MET308 LYS309 PHE310 GLY311 VAL312 ILE313 ILE314 ASP315 ALA316 LYS317 GLY318 PRO319 ASP320 ARG321 VAL322 ASN323 PRO324 PRO325 VAL326 SER327 SER328 GLN329 CYS330 VAL331 PHE332 THR333 GLU334 LEU335 ASP336 ALA337 HIS338 LEU339 THR340 PRO341 ASN342 ILE343 ASP344 ALA345 SER346 LEU347 PHE348 LYS349 GLU350 LEU351 SER352 LYS353 TYR354 ILE355 ARG356 GLY357 ILE358 SER359 GLU360 VAL361 THR362 GLU363 ASN364 THR365 GLY366 LYS367 PHE368 SER369 ILE370 ILE371 GLU372 SER373 GLN374 THR375 ARG376 ASP377 SER378 VAL379 TYR380 ARG381 VAL382 GLY383 PRO389 ARG390 PHE391 LEU392 ARG393 MET394 SER395 THR396 ASP397 ILE398 LYS399 THR400 GLY401 ARG402 VAL403 GLY404 GLN405 PHE406 ILE407 GLU408 LYS409 ARG410 HIS411 VAL412 ALA413 GLN414 LEU415 LEU416 LEU417 TYR418 SER419 PRO420 LYS421 ASP422 SER423 TYR424 ASP425 VAL426 LYS427 ILE428 SER429 LEU430 ASN431 LEU432 GLU433 LEU434 PRO435 VAL436 PRO437 ASP438 ASN439 ASP440 PRO441 PRO442 GLU443 LYS444 TYR445 LYS446 SER447 GLN448 SER449 PRO450 ILE451 SER452 GLU453 ARG454 THR455 LYS456 ASP457 ARG458 VAL459 SER460 TYR461 ILE462 HIS463 ASN464 ASP465 SER466 CYS467 THR468 ARG469 ILE470 ASP471 ILE472 THR473 LYS474 VAL475 GLU476 ASN477 HIS478 SER487 GLU488 THR489 THR490 HIS491 GLU492 VAL493 GLU494 LEU495 GLU496 ILE497 ASN498 THR499 PRO500 ALA501 LEU502 LEU503 ASN504 ALA505 PHE506 ASP507 ASN508 ILE509 THR510 ASN511 ASP512 SER513 LYS514 GLU515 TYR516 ALA517 SER518 LEU519 ILE520 ARG521 THR522 PHE523 LEU524 ASN525 ASN526 GLY527 THR528 ILE529 ILE530 ARG531 ARG532 LYS533 LEU534 SER535 SER536 LEU537 SER538 TYR539
Unit 2 HIS239 MET240 TYR241 ARG242 ASN243 VAL244 PRO245 ILE246 TRP247 ALA248 GLN249 LYS250 TRP251 LYS252 PRO253 THR254 ILE255 LYS256 ALA257 LEU258 GLN259 SER260 ILE261 ASN262 VAL263 LYS264 ASP265 LEU266 LYS267 ILE268 ASP269 PRO270 SER271 PHE272 LEU273 ASN274 ILE275 ILE276 PRO277 ASP278 ASP279 ASP280 LEU281 THR282 LYS283 SER284 VAL285 GLN286 ASP287 TRP288 VAL289 TYR290 ALA291 THR292 ILE293 TYR294 SER295 ILE296 ALA297 PRO298 GLU299 LEU300 ARG301 SER302 PHE303 ILE304 GLU305 LEU306 GLU307 MET308 LYS309 PHE310 GLY311 VAL312 ILE313 ILE314 ASP315 ALA316 LYS317 GLY318 PRO319 ASP320 ARG321 VAL322 ASN323 PRO324 PRO325 VAL326 SER327 SER328 GLN329 CYS330 VAL331 PHE332 THR333 GLU334 LEU335 ASP336 ALA337 HIS338 LEU339 THR340 PRO341 ASN342 ILE343 ASP344 ALA345 SER346 LEU347 PHE348 LYS349 GLU350 LEU351 SER352 LYS353 TYR354 ILE355 ARG356 GLY357 ILE358 SER359 GLU360 VAL361 THR362 GLU363 ASN364 THR365 GLY366 LYS367 PHE368 SER369 ILE370 ILE371 GLU372 SER373 GLN374 THR375 ARG376 ASP377 SER378 VAL379 TYR380 ARG381 VAL382 GLY383 PRO389 ARG390 PHE391 LEU392 ARG393 MET394 SER395 THR396 ASP397 ILE398 LYS399 THR400 GLY401 ARG402 VAL403 GLY404 GLN405 PHE406 ILE407 GLU408 LYS409 ARG410 HIS411 VAL412 ALA413 GLN414 LEU415 LEU416 LEU417 TYR418 SER419 PRO420 LYS421 ASP422 SER423 TYR424 ASP425 VAL426 LYS427 ILE428 SER429 LEU430 ASN431 LEU432 GLU433 LEU434 PRO435 VAL436 PRO437 ASP438 ASN439 ASP440 PRO441 PRO442 GLU443 LYS444 TYR445 LYS446 SER447 GLN448 SER449 PRO450 ILE451 SER452 GLU453 ARG454 THR455 LYS456 ASP457 ARG458 VAL459 SER460 TYR461 ILE462 HIS463 ASN464 ASP465 SER466 CYS467 THR468 ARG469 ILE470 ASP471 ILE472 THR473 LYS474 VAL475 GLU476 ASN477 HIS478 SER487 GLU488 THR489 THR490 HIS491 GLU492 VAL493 GLU494 LEU495 GLU496 ILE497 ASN498 THR499 PRO500 ALA501 LEU502 LEU503 ASN504 ALA505 PHE506 ASP507 ASN508 ILE509 THR510 ASN511 ASP512 SER513 LYS514 GLU515 TYR516 ALA517 SER518 LEU519 ILE520 ARG521 THR522 PHE523 LEU524 ASN525 ASN526 GLY527 THR528 ILE529 ILE530 ARG531 ARG532 LYS533 LEU534 SER535 SER536 LEU537 SER538 TYR539
Unit 3 HIS239 MET240 TYR241 ARG242 ASN243 VAL244 PRO245 ILE246 TRP247 ALA248 GLN249 LYS250 TRP251 LYS252 PRO253 THR254 ILE255 LYS256 ALA257 LEU258 GLN259 SER260 ILE261 ASN262 VAL263 LYS264 ASP265 LEU266 LYS267 ILE268 ASP269 PRO270 SER271 PHE272 LEU273 ASN274 ILE275 ILE276 PRO277 ASP278 ASP279 ASP280 LEU281 THR282 LYS283 SER284 VAL285 GLN286 ASP287 TRP288 VAL289 TYR290 ALA291 THR292 ILE293 TYR294 SER295 ILE296 ALA297 PRO298 GLU299 LEU300 ARG301 SER302 PHE303 ILE304 GLU305 LEU306 GLU307 MET308 LYS309 PHE310 GLY311 VAL312 ILE313 ILE314 ASP315 ALA316 LYS317 GLY318 PRO319 ASP320 ARG321 VAL322 ASN323 PRO324 PRO325 VAL326 SER327 SER328 GLN329 CYS330 VAL331 PHE332 THR333 GLU334 LEU335 ASP336 ALA337 HIS338 LEU339 THR340 PRO341 ASN342 ILE343 ASP344 ALA345 SER346 LEU347 PHE348 LYS349 GLU350 LEU351 SER352 LYS353 TYR354 ILE355 ARG356 GLY357 ILE358 SER359 GLU360 VAL361 THR362 GLU363 ASN364 THR365 GLY366 LYS367 PHE368 SER369 ILE370 ILE371 GLU372 SER373 GLN374 THR375 ARG376 ASP377 SER378 VAL379 TYR380 ARG381 VAL382 GLY383 PRO389 ARG390 PHE391 LEU392 ARG393 MET394 SER395 THR396 ASP397 ILE398 LYS399 THR400 GLY401 ARG402 VAL403 GLY404 GLN405 PHE406 ILE407 GLU408 LYS409 ARG410 HIS411 VAL412 ALA413 GLN414 LEU415 LEU416 LEU417 TYR418 SER419 PRO420 LYS421 ASP422 SER423 TYR424 ASP425 VAL426 LYS427 ILE428 SER429 LEU430 ASN431 LEU432 GLU433 LEU434 PRO435 VAL436 PRO437 ASP438 ASN439 ASP440 PRO441 PRO442 GLU443 LYS444 TYR445 LYS446 SER447 GLN448 SER449 PRO450 ILE451 SER452 GLU453 ARG454 THR455 LYS456 ASP457 ARG458 VAL459 SER460 TYR461 ILE462 HIS463 ASN464 ASP465 SER466 CYS467 THR468 ARG469 ILE470 ASP471 ILE472 THR473 LYS474 VAL475 GLU476 ASN477 HIS478 SER487 GLU488 THR489 THR490 HIS491 GLU492 VAL493 GLU494 LEU495 GLU496 ILE497 ASN498 THR499 PRO500 ALA501 LEU502 LEU503 ASN504 ALA505 PHE506 ASP507 ASN508 ILE509 THR510 ASN511 ASP512 SER513 LYS514 GLU515 TYR516 ALA517 SER518 LEU519 ILE520 ARG521 THR522 PHE523 LEU524 ASN525 ASN526 GLY527 THR528 ILE529 ILE530 ARG531 ARG532 LYS533 LEU534 SER535 SER536 LEU537 SER538 TYR539
Ligands
Unit 4 MN550 SO4601
Unit 5 MN550 SO4602
Unit 6 MN550 SO4603
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany