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Sequence, Chains, Asymmetric and Biological Units

Title CO-CRYSTAL STRUCTURE OF RAT PROTEIN FARNESYLTRANSFERASE COMPLEXED WITH A K-RAS4B PEPTIDE SUBSTRATE AND FPP ANALOG AT 2.0A RESOLUTION
Keywords FTASE, PFT, PFTASE, FARNESYLTRANSFERASE, FARNESYL TRANSFERASE, CAAX, RAS, CANCER
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1D8D     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   FARNESYLTRANSFERASE (ALPHA SUBUNIT)  A 323 2745 0
2  Protein   FARNESYLTRANSFERASE (BETA SUBUNIT)  B 407 3203 0
3  Protein   K-RAS4B PEPTIDE SUBSTRATE  P 11 88 0
4  Ligand   FARNESYLTRANSFERASE (ALPHA SUBUNIT)  A 1 0 1
5  Ligand   FARNESYLTRANSFERASE (BETA SUBUNIT)  B 3 0 32
6  Ligand   K-RAS4B PEPTIDE SUBSTRATE  P 2 0 8
7 Water     447 0 447
total       1194 6036 488

Proteins
Unit 1 PHE55 LEU56 SER57 LEU58 ASP59 SER60 PRO61 THR62 TYR63 VAL64 LEU65 TYR66 ARG67 ASP68 ARG69 ALA70 GLU71 TRP72 ALA73 ASP74 ILE75 ASP76 PRO77 VAL78 PRO79 GLN80 ASN81 ASP82 GLY83 PRO84 SER85 PRO86 VAL87 VAL88 GLN89 ILE90 ILE91 TYR92 SER93 GLU94 LYS95 PHE96 ARG97 ASP98 VAL99 TYR100 ASP101 TYR102 PHE103 ARG104 ALA105 VAL106 LEU107 GLN108 ARG109 ASP110 GLU111 ARG112 SER113 GLU114 ARG115 ALA116 PHE117 LYS118 LEU119 THR120 ARG121 ASP122 ALA123 ILE124 GLU125 LEU126 ASN127 ALA128 ALA129 ASN130 TYR131 THR132 VAL133 TRP134 HIS135 PHE136 ARG137 ARG138 VAL139 LEU140 LEU141 ARG142 SER143 LEU144 GLN145 LYS146 ASP147 LEU148 GLN149 GLU150 GLU151 MET152 ASN153 TYR154 ILE155 ILE156 ALA157 ILE158 ILE159 GLU160 GLU161 GLN162 PRO163 LYS164 ASN165 TYR166 GLN167 VAL168 TRP169 HIS170 HIS171 ARG172 ARG173 VAL174 LEU175 VAL176 GLU177 TRP178 LEU179 LYS180 ASP181 PRO182 SER183 GLN184 GLU185 LEU186 GLU187 PHE188 ILE189 ALA190 ASP191 ILE192 LEU193 ASN194 GLN195 ASP196 ALA197 LYS198 ASN199 TYR200 HIS201 ALA202 TRP203 GLN204 HIS205 ARG206 GLN207 TRP208 VAL209 ILE210 GLN211 GLU212 PHE213 ARG214 LEU215 TRP216 ASP217 ASN218 GLU219 LEU220 GLN221 TYR222 VAL223 ASP224 GLN225 LEU226 LEU227 LYS228 GLU229 ASP230 VAL231 ARG232 ASN233 ASN234 SER235 VAL236 TRP237 ASN238 GLN239 ARG240 HIS241 PHE242 VAL243 ILE244 SER245 ASN246 THR247 THR248 GLY249 TYR250 SER251 ASP252 ARG253 ALA254 VAL255 LEU256 GLU257 ARG258 GLU259 VAL260 GLN261 TYR262 THR263 LEU264 GLU265 MET266 ILE267 LYS268 LEU269 VAL270 PRO271 HIS272 ASN273 GLU274 SER275 ALA276 TRP277 ASN278 TYR279 LEU280 LYS281 GLY282 ILE283 LEU284 GLN285 ASP286 ARG287 GLY288 LEU289 SER290 ARG291 TYR292 PRO293 ASN294 LEU295 LEU296 ASN297 GLN298 LEU299 LEU300 ASP301 LEU302 GLN303 PRO304 SER305 HIS306 SER307 SER308 PRO309 TYR310 LEU311 ILE312 ALA313 PHE314 LEU315 VAL316 ASP317 ILE318 TYR319 GLU320 ASP321 MET322 LEU323 GLU324 ASN325 GLN326 CYS327 ASP328 ASN329 LYS330 GLU331 ASP332 ILE333 LEU334 ASN335 LYS336 ALA337 LEU338 GLU339 LEU340 CYS341 GLU342 ILE343 LEU344 ALA345 LYS346 GLU347 LYS348 ASP349 THR350 ILE351 ARG352 LYS353 GLU354 TYR355 TRP356 ARG357 TYR358 ILE359 GLY360 ARG361 SER362 LEU363 GLN364 SER365 LYS366 HIS367 SER368 ARG369 GLU370 SER371 ASP372 ILE373 PRO374 ALA375 SER376 VAL377
Unit 2 PRO17 VAL18 TRP19 SER20 GLU21 PRO22 LEU23 TYR24 SER25 LEU26 ARG27 PRO28 GLU29 HIS30 ALA31 ARG32 GLU33 ARG34 LEU35 GLN36 ASP37 ASP38 SER39 VAL40 GLU41 THR42 VAL43 THR44 SER45 ILE46 GLU47 GLN48 ALA49 LYS50 VAL51 GLU52 GLU53 LYS54 ILE55 GLN56 GLU57 VAL58 PHE59 SER60 SER61 TYR62 LYS63 PHE64 ASN65 HIS66 LEU67 VAL68 PRO69 ARG70 LEU71 VAL72 LEU73 GLN74 ARG75 GLU76 LYS77 HIS78 PHE79 HIS80 TYR81 LEU82 LYS83 ARG84 GLY85 LEU86 ARG87 GLN88 LEU89 THR90 ASP91 ALA92 TYR93 GLU94 CYS95 LEU96 ASP97 ALA98 SER99 ARG100 PRO101 TRP102 LEU103 CYS104 TYR105 TRP106 ILE107 LEU108 HIS109 SER110 LEU111 GLU112 LEU113 LEU114 ASP115 GLU116 PRO117 ILE118 PRO119 GLN120 ILE121 VAL122 ALA123 THR124 ASP125 VAL126 CYS127 GLN128 PHE129 LEU130 GLU131 LEU132 CYS133 GLN134 SER135 PRO136 ASP137 GLY138 GLY139 PHE140 GLY141 GLY142 GLY143 PRO144 GLY145 GLN146 TYR147 PRO148 HIS149 LEU150 ALA151 PRO152 THR153 TYR154 ALA155 ALA156 VAL157 ASN158 ALA159 LEU160 CYS161 ILE162 ILE163 GLY164 THR165 GLU166 GLU167 ALA168 TYR169 ASN170 VAL171 ILE172 ASN173 ARG174 GLU175 LYS176 LEU177 LEU178 GLN179 TYR180 LEU181 TYR182 SER183 LEU184 LYS185 GLN186 PRO187 ASP188 GLY189 SER190 PHE191 LEU192 MET193 HIS194 VAL195 GLY196 GLY197 GLU198 VAL199 ASP200 VAL201 ARG202 SER203 ALA204 TYR205 CYS206 ALA207 ALA208 SER209 VAL210 ALA211 SER212 LEU213 THR214 ASN215 ILE216 ILE217 THR218 PRO219 ASP220 LEU221 PHE222 GLU223 GLY224 THR225 ALA226 GLU227 TRP228 ILE229 ALA230 ARG231 CYS232 GLN233 ASN234 TRP235 GLU236 GLY237 GLY238 ILE239 GLY240 GLY241 VAL242 PRO243 GLY244 MET245 GLU246 ALA247 HIS248 GLY249 GLY250 TYR251 THR252 PHE253 CYS254 GLY255 LEU256 ALA257 ALA258 LEU259 VAL260 ILE261 LEU262 LYS263 LYS264 GLU265 ARG266 SER267 LEU268 ASN269 LEU270 LYS271 SER272 LEU273 LEU274 GLN275 TRP276 VAL277 THR278 SER279 ARG280 GLN281 MET282 ARG283 PHE284 GLU285 GLY286 GLY287 PHE288 GLN289 GLY290 ARG291 CYS292 ASN293 LYS294 LEU295 VAL296 ASP297 GLY298 CYS299 TYR300 SER301 PHE302 TRP303 GLN304 ALA305 GLY306 LEU307 LEU308 PRO309 LEU310 LEU311 HIS312 ARG313 ALA314 LEU315 HIS316 ALA317 GLN318 GLY319 ASP320 PRO321 ALA322 LEU323 SER324 MET325 SER326 HIS327 TRP328 MET329 PHE330 HIS331 GLN332 GLN333 ALA334 LEU335 GLN336 GLU337 TYR338 ILE339 LEU340 MET341 CYS342 CYS343 GLN344 CYS345 PRO346 ALA347 GLY348 GLY349 LEU350 LEU351 ASP352 LYS353 PRO354 GLY355 LYS356 SER357 ARG358 ASP359 PHE360 TYR361 HIS362 THR363 CYS364 TYR365 CYS366 LEU367 SER368 GLY369 LEU370 SER371 ILE372 ALA373 GLN374 HIS375 PHE376 GLY377 SER378 GLY379 ALA380 MET381 LEU382 HIS383 ASP384 VAL385 VAL386 MET387 GLY388 VAL389 PRO390 GLU391 ASN392 VAL393 LEU394 GLN395 PRO396 THR397 HIS398 PRO399 VAL400 TYR401 ASN402 ILE403 GLY404 PRO405 ASP406 LYS407 VAL408 ILE409 GLN410 ALA411 THR412 THR413 HIS414 PHE415 LEU416 GLN417 LYS418 PRO419 VAL420 PRO421 GLY422 PHE423
Unit 3 LYS1 LYS2 LYS3 SER4 LYS5 THR6 LYS7 CYS8 VAL9 ILE10 MET11

Ligands
Unit 4 ZN1001
Unit 5 FII1000 ACT3002 ACT3003
Unit 6 ACT3000 ACT3001

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany