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Sequence, Chains, Asymmetric and Biological Units

Title SOLUTION STRUCTURE OF A PHOSPHOROTHIOATE MODIFIED RNA BINDING SITE FOR PHAGE MS2 COAT PROTEIN
Keywords RNA HAIRPIN, PHOSPHOROTHIOATE, THIOPHOSPHATE, BULGED BASE, STEM-LOOP
Experiment NMR
Number of Models  10


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1D0T     released     available     available     Quaternary Structure Server  
NDB   1D0T                         


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  RNA    A 21 508 165
total       21 508 165

Nucleic acids
Unit 1 G1 G2 G3 SRA4 U5 C6 SRA7 C8 C9 SRA10 U11 U12 SRA13 G14 G15 G16 SRA17 U18 C19 U20 C21

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany