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Sequence, Chains, Asymmetric and Biological Units

Title STRUCTURE OF TNF RECEPTOR ASSOCIATED FACTOR 2 IN COMPLEX WIT PEPTIDE
Keywords B-SANDWICH, PROTEIN-PEPTIDE COMPLEX, APOPTOSIS
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   1D0J     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein    A 168 1282 0
2  Protein    B 168 1282 0
3  Protein    C 168 1282 0
4  Protein    D 168 1282 0
5  Protein    E 168 1282 0
6  Protein    F 168 1282 0
7  Protein   4-1BB LIGAND RECEPTOR  G 5 34 0
8  Protein   4-1BB LIGAND RECEPTOR  H 5 34 0
9  Protein   4-1BB LIGAND RECEPTOR  I 7 38 3
10  Protein   4-1BB LIGAND RECEPTOR  J 6 38 0
11  Protein   4-1BB LIGAND RECEPTOR  K 5 34 0
12 Water     239 0 239
total       1275 7870 242
Proteins
Unit 1 ALA334 MET335 ALA336 ASP337 LEU338 GLU339 GLN340 LYS341 VAL342 LEU343 GLU344 MET345 GLU346 ALA347 SER348 THR349 TYR350 ASP351 GLY352 VAL353 PHE354 ILE355 TRP356 LYS357 ILE358 SER359 ASP360 PHE361 ALA362 ARG363 LYS364 ARG365 GLN366 GLU367 ALA368 VAL369 ALA370 GLY371 ARG372 ILE373 PRO374 ALA375 ILE376 PHE377 SER378 PRO379 ALA380 PHE381 TYR382 THR383 SER384 ARG385 TYR386 GLY387 TYR388 LYS389 MET390 CYS391 LEU392 ARG393 ILE394 TYR395 LEU396 ASN397 GLY398 ASP399 GLY400 THR401 GLY402 ARG403 GLY404 THR405 HIS406 LEU407 SER408 LEU409 PHE410 PHE411 VAL412 VAL413 MET414 LYS415 GLY416 PRO417 ASN418 ASP419 ALA420 LEU421 LEU422 ARG423 TRP424 PRO425 PHE426 ASN427 GLN428 LYS429 VAL430 THR431 LEU432 MET433 LEU434 LEU435 ASP436 GLN437 ASN438 ASN439 ARG440 GLU441 HIS442 VAL443 ILE444 ASP445 ALA446 PHE447 ARG448 PRO449 ASP450 VAL451 THR452 SER453 SER454 SER455 PHE456 GLN457 ARG458 PRO459 VAL460 ASN461 ASP462 MET463 ASN464 ILE465 ALA466 SER467 GLY468 CYS469 PRO470 LEU471 PHE472 CYS473 PRO474 VAL475 SER476 LYS477 MET478 GLU479 ALA480 LYS481 ASN482 SER483 TYR484 VAL485 ARG486 ASP487 ASP488 ALA489 ILE490 PHE491 ILE492 LYS493 ALA494 ILE495 VAL496 ASP497 LEU498 THR499 GLY500 LEU501
Unit 2 ALA334 MET335 ALA336 ASP337 LEU338 GLU339 GLN340 LYS341 VAL342 LEU343 GLU344 MET345 GLU346 ALA347 SER348 THR349 TYR350 ASP351 GLY352 VAL353 PHE354 ILE355 TRP356 LYS357 ILE358 SER359 ASP360 PHE361 ALA362 ARG363 LYS364 ARG365 GLN366 GLU367 ALA368 VAL369 ALA370 GLY371 ARG372 ILE373 PRO374 ALA375 ILE376 PHE377 SER378 PRO379 ALA380 PHE381 TYR382 THR383 SER384 ARG385 TYR386 GLY387 TYR388 LYS389 MET390 CYS391 LEU392 ARG393 ILE394 TYR395 LEU396 ASN397 GLY398 ASP399 GLY400 THR401 GLY402 ARG403 GLY404 THR405 HIS406 LEU407 SER408 LEU409 PHE410 PHE411 VAL412 VAL413 MET414 LYS415 GLY416 PRO417 ASN418 ASP419 ALA420 LEU421 LEU422 ARG423 TRP424 PRO425 PHE426 ASN427 GLN428 LYS429 VAL430 THR431 LEU432 MET433 LEU434 LEU435 ASP436 GLN437 ASN438 ASN439 ARG440 GLU441 HIS442 VAL443 ILE444 ASP445 ALA446 PHE447 ARG448 PRO449 ASP450 VAL451 THR452 SER453 SER454 SER455 PHE456 GLN457 ARG458 PRO459 VAL460 ASN461 ASP462 MET463 ASN464 ILE465 ALA466 SER467 GLY468 CYS469 PRO470 LEU471 PHE472 CYS473 PRO474 VAL475 SER476 LYS477 MET478 GLU479 ALA480 LYS481 ASN482 SER483 TYR484 VAL485 ARG486 ASP487 ASP488 ALA489 ILE490 PHE491 ILE492 LYS493 ALA494 ILE495 VAL496 ASP497 LEU498 THR499 GLY500 LEU501
Unit 3 ALA334 MET335 ALA336 ASP337 LEU338 GLU339 GLN340 LYS341 VAL342 LEU343 GLU344 MET345 GLU346 ALA347 SER348 THR349 TYR350 ASP351 GLY352 VAL353 PHE354 ILE355 TRP356 LYS357 ILE358 SER359 ASP360 PHE361 ALA362 ARG363 LYS364 ARG365 GLN366 GLU367 ALA368 VAL369 ALA370 GLY371 ARG372 ILE373 PRO374 ALA375 ILE376 PHE377 SER378 PRO379 ALA380 PHE381 TYR382 THR383 SER384 ARG385 TYR386 GLY387 TYR388 LYS389 MET390 CYS391 LEU392 ARG393 ILE394 TYR395 LEU396 ASN397 GLY398 ASP399 GLY400 THR401 GLY402 ARG403 GLY404 THR405 HIS406 LEU407 SER408 LEU409 PHE410 PHE411 VAL412 VAL413 MET414 LYS415 GLY416 PRO417 ASN418 ASP419 ALA420 LEU421 LEU422 ARG423 TRP424 PRO425 PHE426 ASN427 GLN428 LYS429 VAL430 THR431 LEU432 MET433 LEU434 LEU435 ASP436 GLN437 ASN438 ASN439 ARG440 GLU441 HIS442 VAL443 ILE444 ASP445 ALA446 PHE447 ARG448 PRO449 ASP450 VAL451 THR452 SER453 SER454 SER455 PHE456 GLN457 ARG458 PRO459 VAL460 ASN461 ASP462 MET463 ASN464 ILE465 ALA466 SER467 GLY468 CYS469 PRO470 LEU471 PHE472 CYS473 PRO474 VAL475 SER476 LYS477 MET478 GLU479 ALA480 LYS481 ASN482 SER483 TYR484 VAL485 ARG486 ASP487 ASP488 ALA489 ILE490 PHE491 ILE492 LYS493 ALA494 ILE495 VAL496 ASP497 LEU498 THR499 GLY500 LEU501
Unit 4 ALA334 MET335 ALA336 ASP337 LEU338 GLU339 GLN340 LYS341 VAL342 LEU343 GLU344 MET345 GLU346 ALA347 SER348 THR349 TYR350 ASP351 GLY352 VAL353 PHE354 ILE355 TRP356 LYS357 ILE358 SER359 ASP360 PHE361 ALA362 ARG363 LYS364 ARG365 GLN366 GLU367 ALA368 VAL369 ALA370 GLY371 ARG372 ILE373 PRO374 ALA375 ILE376 PHE377 SER378 PRO379 ALA380 PHE381 TYR382 THR383 SER384 ARG385 TYR386 GLY387 TYR388 LYS389 MET390 CYS391 LEU392 ARG393 ILE394 TYR395 LEU396 ASN397 GLY398 ASP399 GLY400 THR401 GLY402 ARG403 GLY404 THR405 HIS406 LEU407 SER408 LEU409 PHE410 PHE411 VAL412 VAL413 MET414 LYS415 GLY416 PRO417 ASN418 ASP419 ALA420 LEU421 LEU422 ARG423 TRP424 PRO425 PHE426 ASN427 GLN428 LYS429 VAL430 THR431 LEU432 MET433 LEU434 LEU435 ASP436 GLN437 ASN438 ASN439 ARG440 GLU441 HIS442 VAL443 ILE444 ASP445 ALA446 PHE447 ARG448 PRO449 ASP450 VAL451 THR452 SER453 SER454 SER455 PHE456 GLN457 ARG458 PRO459 VAL460 ASN461 ASP462 MET463 ASN464 ILE465 ALA466 SER467 GLY468 CYS469 PRO470 LEU471 PHE472 CYS473 PRO474 VAL475 SER476 LYS477 MET478 GLU479 ALA480 LYS481 ASN482 SER483 TYR484 VAL485 ARG486 ASP487 ASP488 ALA489 ILE490 PHE491 ILE492 LYS493 ALA494 ILE495 VAL496 ASP497 LEU498 THR499 GLY500 LEU501
Unit 5 ALA334 MET335 ALA336 ASP337 LEU338 GLU339 GLN340 LYS341 VAL342 LEU343 GLU344 MET345 GLU346 ALA347 SER348 THR349 TYR350 ASP351 GLY352 VAL353 PHE354 ILE355 TRP356 LYS357 ILE358 SER359 ASP360 PHE361 ALA362 ARG363 LYS364 ARG365 GLN366 GLU367 ALA368 VAL369 ALA370 GLY371 ARG372 ILE373 PRO374 ALA375 ILE376 PHE377 SER378 PRO379 ALA380 PHE381 TYR382 THR383 SER384 ARG385 TYR386 GLY387 TYR388 LYS389 MET390 CYS391 LEU392 ARG393 ILE394 TYR395 LEU396 ASN397 GLY398 ASP399 GLY400 THR401 GLY402 ARG403 GLY404 THR405 HIS406 LEU407 SER408 LEU409 PHE410 PHE411 VAL412 VAL413 MET414 LYS415 GLY416 PRO417 ASN418 ASP419 ALA420 LEU421 LEU422 ARG423 TRP424 PRO425 PHE426 ASN427 GLN428 LYS429 VAL430 THR431 LEU432 MET433 LEU434 LEU435 ASP436 GLN437 ASN438 ASN439 ARG440 GLU441 HIS442 VAL443 ILE444 ASP445 ALA446 PHE447 ARG448 PRO449 ASP450 VAL451 THR452 SER453 SER454 SER455 PHE456 GLN457 ARG458 PRO459 VAL460 ASN461 ASP462 MET463 ASN464 ILE465 ALA466 SER467 GLY468 CYS469 PRO470 LEU471 PHE472 CYS473 PRO474 VAL475 SER476 LYS477 MET478 GLU479 ALA480 LYS481 ASN482 SER483 TYR484 VAL485 ARG486 ASP487 ASP488 ALA489 ILE490 PHE491 ILE492 LYS493 ALA494 ILE495 VAL496 ASP497 LEU498 THR499 GLY500 LEU501
Unit 6 ALA334 MET335 ALA336 ASP337 LEU338 GLU339 GLN340 LYS341 VAL342 LEU343 GLU344 MET345 GLU346 ALA347 SER348 THR349 TYR350 ASP351 GLY352 VAL353 PHE354 ILE355 TRP356 LYS357 ILE358 SER359 ASP360 PHE361 ALA362 ARG363 LYS364 ARG365 GLN366 GLU367 ALA368 VAL369 ALA370 GLY371 ARG372 ILE373 PRO374 ALA375 ILE376 PHE377 SER378 PRO379 ALA380 PHE381 TYR382 THR383 SER384 ARG385 TYR386 GLY387 TYR388 LYS389 MET390 CYS391 LEU392 ARG393 ILE394 TYR395 LEU396 ASN397 GLY398 ASP399 GLY400 THR401 GLY402 ARG403 GLY404 THR405 HIS406 LEU407 SER408 LEU409 PHE410 PHE411 VAL412 VAL413 MET414 LYS415 GLY416 PRO417 ASN418 ASP419 ALA420 LEU421 LEU422 ARG423 TRP424 PRO425 PHE426 ASN427 GLN428 LYS429 VAL430 THR431 LEU432 MET433 LEU434 LEU435 ASP436 GLN437 ASN438 ASN439 ARG440 GLU441 HIS442 VAL443 ILE444 ASP445 ALA446 PHE447 ARG448 PRO449 ASP450 VAL451 THR452 SER453 SER454 SER455 PHE456 GLN457 ARG458 PRO459 VAL460 ASN461 ASP462 MET463 ASN464 ILE465 ALA466 SER467 GLY468 CYS469 PRO470 LEU471 PHE472 CYS473 PRO474 VAL475 SER476 LYS477 MET478 GLU479 ALA480 LYS481 ASN482 SER483 TYR484 VAL485 ARG486 ASP487 ASP488 ALA489 ILE490 PHE491 ILE492 LYS493 ALA494 ILE495 VAL496 ASP497 LEU498 THR499 GLY500 LEU501
Unit 7 ALA232 ALA233 GLN234 GLU235 GLU236
Unit 8 ALA232 ALA233 GLN234 GLU235 GLU236
Unit 9 ACE230 GLY231 ALA232 ALA233 GLN234 GLU235 GLU236
Unit 10 GLY231 ALA232 ALA233 GLN234 GLU235 GLU236
Unit 11 ALA232 ALA233 GLN234 GLU235 GLU236
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany