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Title | CRYSTAL STRUCTURE OF AN HDAC HOMOLOG COMPLEXED WITH TRICHOSTATIN A | |
Keywords | ALPHA/BETA FOLD, HYDROXAMIC ACID, CHARGE-RELAY SYSTEM, PENTA-COORDINATED ZINC, LYASE | |
Experiment | X-ray diffraction | |
Number of Models | 1 |
Database | ID code | Status | Coordinate files | ||
Header | Asymmetric unit | Biological unit | |||
PDB | 1C3R | released | available | available | Quaternary Structure Server |
Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
---|---|---|---|---|---|---|
1 | Protein | HDLP (HISTONE DEACETYLASE-LIKE PROTEIN) | A | 372 | 2989 | 0 |
2 | Protein | HDLP (HISTONE DEACETYLASE-LIKE PROTEIN) | B | 372 | 2989 | 0 |
3 | Ligand | HDLP (HISTONE DEACETYLASE-LIKE PROTEIN) | A | 2 | 0 | 23 |
4 | Ligand | HDLP (HISTONE DEACETYLASE-LIKE PROTEIN) | B | 2 | 0 | 23 |
5 | Water | 456 | 0 | 456 | ||
total | 1204 | 5978 | 502 |
Unit 1 | LYS2 LYS3 VAL4 LYS5 LEU6 ILE7 GLY8 THR9 LEU10 ASP11 TYR12 GLY13 LYS14 TYR15 ARG16 TYR17 PRO18 LYS19 ASN20 HIS21 PRO22 LEU23 LYS24 ILE25 PRO26 ARG27 VAL28 SER29 LEU30 LEU31 LEU32 ARG33 PHE34 LYS35 ASP36 ALA37 MET38 ASN39 LEU40 ILE41 ASP42 GLU43 LYS44 GLU45 LEU46 ILE47 LYS48 SER49 ARG50 PRO51 ALA52 THR53 LYS54 GLU55 GLU56 LEU57 LEU58 LEU59 PHE60 HIS61 THR62 GLU63 ASP64 TYR65 ILE66 ASN67 THR68 LEU69 MET70 GLU71 ALA72 GLU73 ARG74 SER75 GLN76 SER77 VAL78 PRO79 LYS80 GLY81 ALA82 ARG83 GLU84 LYS85 TYR86 ASN87 ILE88 GLY89 GLY90 TYR91 GLU92 ASN93 PRO94 VAL95 SER96 TYR97 ALA98 MET99 PHE100 THR101 GLY102 SER103 SER104 LEU105 ALA106 THR107 GLY108 SER109 THR110 VAL111 GLN112 ALA113 ILE114 GLU115 GLU116 PHE117 LEU118 LYS119 GLY120 ASN121 VAL122 ALA123 PHE124 ASN125 PRO126 ALA127 GLY128 GLY129 MET130 HIS131 HIS132 ALA133 PHE134 LYS135 SER136 ARG137 ALA138 ASN139 GLY140 PHE141 CYS142 TYR143 ILE144 ASN145 ASN146 PRO147 ALA148 VAL149 GLY150 ILE151 GLU152 TYR153 LEU154 ARG155 LYS156 LYS157 GLY158 PHE159 LYS160 ARG161 ILE162 LEU163 TYR164 ILE165 ASP166 LEU167 ASP168 ALA169 HIS170 HIS171 CYS172 ASP173 GLY174 VAL175 GLN176 GLU177 ALA178 PHE179 TYR180 ASP181 THR182 ASP183 GLN184 VAL185 PHE186 VAL187 LEU188 SER189 LEU190 HIS191 GLN192 SER193 PRO194 GLU195 TYR196 ALA197 PHE198 PRO199 PHE200 GLU201 LYS202 GLY203 PHE204 LEU205 GLU206 GLU207 ILE208 GLY209 GLU210 GLY211 LYS212 GLY213 LYS214 GLY215 TYR216 ASN217 LEU218 ASN219 ILE220 PRO221 LEU222 PRO223 LYS224 GLY225 LEU226 ASN227 ASP228 ASN229 GLU230 PHE231 LEU232 PHE233 ALA234 LEU235 GLU236 LYS237 SER238 LEU239 GLU240 ILE241 VAL242 LYS243 GLU244 VAL245 PHE246 GLU247 PRO248 GLU249 VAL250 TYR251 LEU252 LEU253 GLN254 LEU255 GLY256 THR257 ASP258 PRO259 LEU260 LEU261 GLU262 ASP263 TYR264 LEU265 SER266 LYS267 PHE268 ASN269 LEU270 SER271 ASN272 VAL273 ALA274 PHE275 LEU276 LYS277 ALA278 PHE279 ASN280 ILE281 VAL282 ARG283 GLU284 VAL285 PHE286 GLY287 GLU288 GLY289 VAL290 TYR291 LEU292 GLY293 GLY294 GLY295 GLY296 TYR297 HIS298 PRO299 TYR300 ALA301 LEU302 ALA303 ARG304 ALA305 TRP306 THR307 LEU308 ILE309 TRP310 CYS311 GLU312 LEU313 SER314 GLY315 ARG316 GLU317 VAL318 PRO319 GLU320 LYS321 LEU322 ASN323 ASN324 LYS325 ALA326 LYS327 GLU328 LEU329 LEU330 LYS331 SER332 ILE333 ASP334 PHE335 GLU336 GLU337 PHE338 ASP339 ASP340 GLU341 VAL342 ASP343 ARG344 SER345 TYR346 MET347 LEU348 GLU349 THR350 LEU351 LYS352 ASP353 PRO354 TRP355 ARG356 GLY357 GLY358 GLU359 VAL360 ARG361 LYS362 GLU363 VAL364 LYS365 ASP366 THR367 LEU368 GLU369 LYS370 ALA371 LYS372 ALA373 |
Unit 2 | LYS2 LYS3 VAL4 LYS5 LEU6 ILE7 GLY8 THR9 LEU10 ASP11 TYR12 GLY13 LYS14 TYR15 ARG16 TYR17 PRO18 LYS19 ASN20 HIS21 PRO22 LEU23 LYS24 ILE25 PRO26 ARG27 VAL28 SER29 LEU30 LEU31 LEU32 ARG33 PHE34 LYS35 ASP36 ALA37 MET38 ASN39 LEU40 ILE41 ASP42 GLU43 LYS44 GLU45 LEU46 ILE47 LYS48 SER49 ARG50 PRO51 ALA52 THR53 LYS54 GLU55 GLU56 LEU57 LEU58 LEU59 PHE60 HIS61 THR62 GLU63 ASP64 TYR65 ILE66 ASN67 THR68 LEU69 MET70 GLU71 ALA72 GLU73 ARG74 SER75 GLN76 SER77 VAL78 PRO79 LYS80 GLY81 ALA82 ARG83 GLU84 LYS85 TYR86 ASN87 ILE88 GLY89 GLY90 TYR91 GLU92 ASN93 PRO94 VAL95 SER96 TYR97 ALA98 MET99 PHE100 THR101 GLY102 SER103 SER104 LEU105 ALA106 THR107 GLY108 SER109 THR110 VAL111 GLN112 ALA113 ILE114 GLU115 GLU116 PHE117 LEU118 LYS119 GLY120 ASN121 VAL122 ALA123 PHE124 ASN125 PRO126 ALA127 GLY128 GLY129 MET130 HIS131 HIS132 ALA133 PHE134 LYS135 SER136 ARG137 ALA138 ASN139 GLY140 PHE141 CYS142 TYR143 ILE144 ASN145 ASN146 PRO147 ALA148 VAL149 GLY150 ILE151 GLU152 TYR153 LEU154 ARG155 LYS156 LYS157 GLY158 PHE159 LYS160 ARG161 ILE162 LEU163 TYR164 ILE165 ASP166 LEU167 ASP168 ALA169 HIS170 HIS171 CYS172 ASP173 GLY174 VAL175 GLN176 GLU177 ALA178 PHE179 TYR180 ASP181 THR182 ASP183 GLN184 VAL185 PHE186 VAL187 LEU188 SER189 LEU190 HIS191 GLN192 SER193 PRO194 GLU195 TYR196 ALA197 PHE198 PRO199 PHE200 GLU201 LYS202 GLY203 PHE204 LEU205 GLU206 GLU207 ILE208 GLY209 GLU210 GLY211 LYS212 GLY213 LYS214 GLY215 TYR216 ASN217 LEU218 ASN219 ILE220 PRO221 LEU222 PRO223 LYS224 GLY225 LEU226 ASN227 ASP228 ASN229 GLU230 PHE231 LEU232 PHE233 ALA234 LEU235 GLU236 LYS237 SER238 LEU239 GLU240 ILE241 VAL242 LYS243 GLU244 VAL245 PHE246 GLU247 PRO248 GLU249 VAL250 TYR251 LEU252 LEU253 GLN254 LEU255 GLY256 THR257 ASP258 PRO259 LEU260 LEU261 GLU262 ASP263 TYR264 LEU265 SER266 LYS267 PHE268 ASN269 LEU270 SER271 ASN272 VAL273 ALA274 PHE275 LEU276 LYS277 ALA278 PHE279 ASN280 ILE281 VAL282 ARG283 GLU284 VAL285 PHE286 GLY287 GLU288 GLY289 VAL290 TYR291 LEU292 GLY293 GLY294 GLY295 GLY296 TYR297 HIS298 PRO299 TYR300 ALA301 LEU302 ALA303 ARG304 ALA305 TRP306 THR307 LEU308 ILE309 TRP310 CYS311 GLU312 LEU313 SER314 GLY315 ARG316 GLU317 VAL318 PRO319 GLU320 LYS321 LEU322 ASN323 ASN324 LYS325 ALA326 LYS327 GLU328 LEU329 LEU330 LYS331 SER332 ILE333 ASP334 PHE335 GLU336 GLU337 PHE338 ASP339 ASP340 GLU341 VAL342 ASP343 ARG344 SER345 TYR346 MET347 LEU348 GLU349 THR350 LEU351 LYS352 ASP353 PRO354 TRP355 ARG356 GLY357 GLY358 GLU359 VAL360 ARG361 LYS362 GLU363 VAL364 LYS365 ASP366 THR367 LEU368 GLU369 LYS370 ALA371 LYS372 ALA373 |
Unit 3 | ZN501 TSN502 |
Unit 4 | ZN503 TSN504 |
Perl script: | PDBscan.pl (15 Sep 2016) |
Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |