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Sequence, Chains, Asymmetric and Biological Units

Title SOLUTION STRUCTURE OF A DNA.RNA HYBRID CONTAINING AN ALPHAT- ANOMERIC THYMIDINE AND POLARITY REVERSALS
Keywords DNA/RNA HYBRID, ALPHAT-ANOMERIC THYMIDINE, 3'-3'/5'-5' PHOSPHODIESTER LINKAGES, DNA-RNA HYBRID
Experiment NMR
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1C2Q     released     available     available     Quaternary Structure Server  
NDB   1C2Q                         


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Other macromolecule   5'-D(ATGG-3'-3'-(T3P)-5'-5'-GCTC)-3'  A 9 254 32
2  RNA    B 9 289 0
total       18 543 32

Nucleic acids
Unit 2 G10 A11 G12 C13 A14 C15 C16 A17 U18

Other macromolecules
Unit 1 DA1 DT2 DG3 DG4 T3P5 DG6 DC7 DT8 DC9

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany