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Sequence, Chains, Asymmetric and Biological Units

Title HIV-1 RNA A-RICH HAIRPIN LOOP
Keywords HIV-1 GENOMIC RNA, REVERSE TRANSCRIPTASE INITIATION, RNA HAIRPIN LOOP
Experiment NMR
Number of Models  21


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1BVJ     released     available     available     Quaternary Structure Server  
NDB   1BVJ                         


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  RNA    A 23 719 0
total       23 719 0

Nucleic acids
Unit 1 G1 G2 C3 G4 A5 C6 G7 G8 U9 G10 U11 A12 A13 A14 A15 A16 U17 C18 U19 C20 G21 C22 C23

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany