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Sequence, Chains, Asymmetric and Biological Units

Title LOOP D/LOOP E ARM OF ESCHERICHIA COLI 5S RRNA, NMR, MINIMIZED AVERAGE STRUCTURE
Keywords 5S RRNA, INTERNAL LOOP, CROSS-STRAND STACK, TRANSLATION, RIBOSOME, RIBOSOMAL RNA COMPLEX
Experiment NMR
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1A4D     released     available     available     Quaternary Structure Server  
NDB   1A4D                         


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  RNA    A 21 681 0
2  RNA    B 20 644 0
total       41 1325 0

Nucleic acids
Unit 1 G68 G69 C70 C71 G72 A73 U74 G75 G76 U77 A78 G79 U80 G81 U82 G83 G84 G85 G86 U87 C88
Unit 2 U89 C90 C91 C92 C93 A94 U95 G96 C97 G98 A99 G100 A101 G102 U103 A104 G105 G106 C107 C108

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany