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Sequence, Chains, Asymmetric and Biological Units

Title PAROMOMYCIN BINDING INDUCES A LOCAL CONFORMATIONAL CHANGE IN THE A SITE OF 16S RRNA, NMR, 20 STRUCTURES
Keywords RIBOSOMAL RNA COMPLEX, NMR, DECODING REGION, RNA-LIGAND INTERACTION
Experiment NMR
Number of Models  20


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   1A3M     released     available     available     Quaternary Structure Server  
NDB   1A3M                         


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  RNA    A 14 444 0
2  RNA    B 13 423 0
total       27 867 0

Nucleic acids
Unit 1 G1 G2 C3 G4 U5 C6 A7 C8 A9 C10 C11 U12 U13 C14
Unit 2 G15 G16 G17 U18 G19 A20 A21 G22 U23 C24 G25 C26 C27

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany