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Sequence, Chains, Asymmetric and Biological Units

Title XYLOSE ISOMERASE FROM BACILLUS STEAROTHERMOPHILUS
Keywords KETOLISOMERASE, XYLOSE METABOLISM, GLUCOSE-FRUCTOSE INTERCON HYDRIDE TRANSFER, ALPHA-BETA BARREL, METALLOENZYME, THERMOP
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   1A0D     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   XYLOSE ISOMERASE  A 437 3493 0
2  Protein   XYLOSE ISOMERASE  B 437 3493 0
3  Protein   XYLOSE ISOMERASE  C 437 3493 0
4  Protein   XYLOSE ISOMERASE  D 437 3493 0
5  Ligand   XYLOSE ISOMERASE  A 2 0 2
6  Ligand   XYLOSE ISOMERASE  B 2 0 2
7  Ligand   XYLOSE ISOMERASE  C 2 0 2
8  Ligand   XYLOSE ISOMERASE  D 2 0 2
9 Water     240 0 240
total       1996 13972 248
Proteins
Unit 1 PRO1 TYR2 PHE3 ASP4 ASN5 ILE6 SER7 THR8 ILE9 ALA10 TYR11 GLU12 GLY13 PRO14 ALA15 SER16 LYS17 ASN18 PRO19 LEU20 ALA21 PHE22 LYS23 PHE24 TYR25 ASN26 PRO27 GLU28 GLU29 LYS30 VAL31 GLY32 ASP33 LYS34 THR35 MET36 GLU37 GLU38 HIS39 LEU40 ARG41 PHE42 SER43 VAL44 ALA45 TYR46 TRP47 HIS48 THR49 PHE50 THR51 GLY52 ASP53 GLY54 SER55 ASP56 PRO57 PHE58 GLY59 ALA60 GLY61 ASN62 MET63 ILE64 ARG65 PRO66 TRP67 ASN68 LYS69 TYR70 SER71 GLY72 MET73 ASP74 LEU75 ALA76 LYS77 ALA78 ARG79 VAL80 GLU81 ALA82 ALA83 PHE84 GLU85 PHE86 PHE87 GLU88 LYS89 LEU90 ASN91 ILE92 PRO93 PHE94 PHE95 CYS96 PHE97 HIS98 ASP99 VAL100 ASP101 ILE102 ALA103 PRO104 GLU105 GLY106 GLU107 THR108 LEU109 LYS110 GLU111 THR112 TYR113 LYS114 ASN115 LEU116 ASP117 ILE118 ILE119 VAL120 ASP121 MET122 ILE123 GLU124 GLU125 TYR126 MET127 LYS128 THR129 SER130 LYS131 THR132 LYS133 LEU134 LEU135 TRP136 ASN137 THR138 ALA139 ASN140 LEU141 PHE142 THR143 HIS144 PRO145 ARG146 PHE147 VAL148 HIS149 GLY150 ALA151 ALA152 THR153 SER154 CYS155 ASN156 ALA157 ASP158 VAL159 PHE160 ALA161 TYR162 ALA163 ALA164 ALA165 LYS166 VAL167 LYS168 LYS169 GLY170 LEU171 GLU172 ILE173 ALA174 LYS175 ARG176 LEU177 GLY178 ALA179 GLU180 ASN181 TYR182 VAL183 PHE184 TRP185 GLY186 GLY187 ARG188 GLU189 GLY190 TYR191 GLU192 THR193 LEU194 LEU195 ASN196 THR197 ASP198 MET199 LYS200 LEU201 GLU202 LEU203 ASP204 ASN205 LEU206 ALA207 ARG208 PHE209 LEU210 HIS211 MET212 ALA213 VAL214 ASP215 TYR216 ALA217 LYS218 GLU219 ILE220 GLY221 PHE222 ASP223 GLY224 GLN225 PHE226 LEU227 ILE228 GLU229 PRO230 LYS231 PRO232 LYS233 GLU234 PRO235 THR236 LYS237 HIS238 GLN239 TYR240 ASP241 PHE242 ASP243 VAL244 ALA245 THR246 ALA247 LEU248 ALA249 PHE250 LEU251 GLN252 THR253 TYR254 GLY255 LEU256 LYS257 ASP258 TYR259 PHE260 LYS261 PHE262 ASN263 ILE264 GLU265 ALA266 ASN267 HIS268 ALA269 THR270 LEU271 ALA272 GLY273 HIS274 THR275 PHE276 GLU277 HIS278 GLU279 LEU280 ARG281 VAL282 ALA283 ARG284 ILE285 HIS286 GLY287 MET288 LEU289 GLY290 SER291 VAL292 ASP293 ALA294 ASN295 GLN296 GLY297 ASP298 MET299 LEU300 LEU301 GLY302 TRP303 ASP304 THR305 ASP306 GLU307 PHE308 PRO309 THR310 ASP311 LEU312 TYR313 SER314 THR315 THR316 LEU317 ALA318 MET319 TYR320 GLU321 ILE322 LEU323 LYS324 ASN325 GLY326 GLY327 LEU328 GLY329 ARG330 GLY331 GLY332 LEU333 ASN334 PHE335 ASP336 ALA337 LYS338 VAL339 ARG340 ARG341 GLY342 SER343 PHE344 GLU345 PRO346 GLU347 ASP348 LEU349 PHE350 TYR351 ALA352 HIS353 ILE354 ALA355 GLY356 MET357 ASP358 SER359 PHE360 ALA361 VAL362 GLY363 LEU364 LYS365 VAL366 ALA367 HIS368 ARG369 LEU370 ILE371 GLU372 ASP373 ARG374 VAL375 PHE376 ASP377 GLU378 PHE379 ILE380 GLU381 GLU382 ARG383 TYR384 LYS385 SER386 TYR387 THR388 GLU389 GLY390 ILE391 GLY392 ARG393 GLU394 ILE395 VAL396 GLU397 GLY398 THR399 ALA400 ASP401 PHE402 HIS403 LYS404 LEU405 GLU406 ALA407 HIS408 ALA409 LEU410 GLN411 LEU412 GLY413 GLU414 ILE415 GLN416 ASN417 GLN418 SER419 GLY420 ARG421 GLN422 GLU423 ARG424 LEU425 LYS426 THR427 LEU428 LEU429 ASN430 GLN431 TYR432 LEU433 LEU434 GLU435 VAL436 CYS437
Unit 2 PRO1 TYR2 PHE3 ASP4 ASN5 ILE6 SER7 THR8 ILE9 ALA10 TYR11 GLU12 GLY13 PRO14 ALA15 SER16 LYS17 ASN18 PRO19 LEU20 ALA21 PHE22 LYS23 PHE24 TYR25 ASN26 PRO27 GLU28 GLU29 LYS30 VAL31 GLY32 ASP33 LYS34 THR35 MET36 GLU37 GLU38 HIS39 LEU40 ARG41 PHE42 SER43 VAL44 ALA45 TYR46 TRP47 HIS48 THR49 PHE50 THR51 GLY52 ASP53 GLY54 SER55 ASP56 PRO57 PHE58 GLY59 ALA60 GLY61 ASN62 MET63 ILE64 ARG65 PRO66 TRP67 ASN68 LYS69 TYR70 SER71 GLY72 MET73 ASP74 LEU75 ALA76 LYS77 ALA78 ARG79 VAL80 GLU81 ALA82 ALA83 PHE84 GLU85 PHE86 PHE87 GLU88 LYS89 LEU90 ASN91 ILE92 PRO93 PHE94 PHE95 CYS96 PHE97 HIS98 ASP99 VAL100 ASP101 ILE102 ALA103 PRO104 GLU105 GLY106 GLU107 THR108 LEU109 LYS110 GLU111 THR112 TYR113 LYS114 ASN115 LEU116 ASP117 ILE118 ILE119 VAL120 ASP121 MET122 ILE123 GLU124 GLU125 TYR126 MET127 LYS128 THR129 SER130 LYS131 THR132 LYS133 LEU134 LEU135 TRP136 ASN137 THR138 ALA139 ASN140 LEU141 PHE142 THR143 HIS144 PRO145 ARG146 PHE147 VAL148 HIS149 GLY150 ALA151 ALA152 THR153 SER154 CYS155 ASN156 ALA157 ASP158 VAL159 PHE160 ALA161 TYR162 ALA163 ALA164 ALA165 LYS166 VAL167 LYS168 LYS169 GLY170 LEU171 GLU172 ILE173 ALA174 LYS175 ARG176 LEU177 GLY178 ALA179 GLU180 ASN181 TYR182 VAL183 PHE184 TRP185 GLY186 GLY187 ARG188 GLU189 GLY190 TYR191 GLU192 THR193 LEU194 LEU195 ASN196 THR197 ASP198 MET199 LYS200 LEU201 GLU202 LEU203 ASP204 ASN205 LEU206 ALA207 ARG208 PHE209 LEU210 HIS211 MET212 ALA213 VAL214 ASP215 TYR216 ALA217 LYS218 GLU219 ILE220 GLY221 PHE222 ASP223 GLY224 GLN225 PHE226 LEU227 ILE228 GLU229 PRO230 LYS231 PRO232 LYS233 GLU234 PRO235 THR236 LYS237 HIS238 GLN239 TYR240 ASP241 PHE242 ASP243 VAL244 ALA245 THR246 ALA247 LEU248 ALA249 PHE250 LEU251 GLN252 THR253 TYR254 GLY255 LEU256 LYS257 ASP258 TYR259 PHE260 LYS261 PHE262 ASN263 ILE264 GLU265 ALA266 ASN267 HIS268 ALA269 THR270 LEU271 ALA272 GLY273 HIS274 THR275 PHE276 GLU277 HIS278 GLU279 LEU280 ARG281 VAL282 ALA283 ARG284 ILE285 HIS286 GLY287 MET288 LEU289 GLY290 SER291 VAL292 ASP293 ALA294 ASN295 GLN296 GLY297 ASP298 MET299 LEU300 LEU301 GLY302 TRP303 ASP304 THR305 ASP306 GLU307 PHE308 PRO309 THR310 ASP311 LEU312 TYR313 SER314 THR315 THR316 LEU317 ALA318 MET319 TYR320 GLU321 ILE322 LEU323 LYS324 ASN325 GLY326 GLY327 LEU328 GLY329 ARG330 GLY331 GLY332 LEU333 ASN334 PHE335 ASP336 ALA337 LYS338 VAL339 ARG340 ARG341 GLY342 SER343 PHE344 GLU345 PRO346 GLU347 ASP348 LEU349 PHE350 TYR351 ALA352 HIS353 ILE354 ALA355 GLY356 MET357 ASP358 SER359 PHE360 ALA361 VAL362 GLY363 LEU364 LYS365 VAL366 ALA367 HIS368 ARG369 LEU370 ILE371 GLU372 ASP373 ARG374 VAL375 PHE376 ASP377 GLU378 PHE379 ILE380 GLU381 GLU382 ARG383 TYR384 LYS385 SER386 TYR387 THR388 GLU389 GLY390 ILE391 GLY392 ARG393 GLU394 ILE395 VAL396 GLU397 GLY398 THR399 ALA400 ASP401 PHE402 HIS403 LYS404 LEU405 GLU406 ALA407 HIS408 ALA409 LEU410 GLN411 LEU412 GLY413 GLU414 ILE415 GLN416 ASN417 GLN418 SER419 GLY420 ARG421 GLN422 GLU423 ARG424 LEU425 LYS426 THR427 LEU428 LEU429 ASN430 GLN431 TYR432 LEU433 LEU434 GLU435 VAL436 CYS437
Unit 3 PRO1 TYR2 PHE3 ASP4 ASN5 ILE6 SER7 THR8 ILE9 ALA10 TYR11 GLU12 GLY13 PRO14 ALA15 SER16 LYS17 ASN18 PRO19 LEU20 ALA21 PHE22 LYS23 PHE24 TYR25 ASN26 PRO27 GLU28 GLU29 LYS30 VAL31 GLY32 ASP33 LYS34 THR35 MET36 GLU37 GLU38 HIS39 LEU40 ARG41 PHE42 SER43 VAL44 ALA45 TYR46 TRP47 HIS48 THR49 PHE50 THR51 GLY52 ASP53 GLY54 SER55 ASP56 PRO57 PHE58 GLY59 ALA60 GLY61 ASN62 MET63 ILE64 ARG65 PRO66 TRP67 ASN68 LYS69 TYR70 SER71 GLY72 MET73 ASP74 LEU75 ALA76 LYS77 ALA78 ARG79 VAL80 GLU81 ALA82 ALA83 PHE84 GLU85 PHE86 PHE87 GLU88 LYS89 LEU90 ASN91 ILE92 PRO93 PHE94 PHE95 CYS96 PHE97 HIS98 ASP99 VAL100 ASP101 ILE102 ALA103 PRO104 GLU105 GLY106 GLU107 THR108 LEU109 LYS110 GLU111 THR112 TYR113 LYS114 ASN115 LEU116 ASP117 ILE118 ILE119 VAL120 ASP121 MET122 ILE123 GLU124 GLU125 TYR126 MET127 LYS128 THR129 SER130 LYS131 THR132 LYS133 LEU134 LEU135 TRP136 ASN137 THR138 ALA139 ASN140 LEU141 PHE142 THR143 HIS144 PRO145 ARG146 PHE147 VAL148 HIS149 GLY150 ALA151 ALA152 THR153 SER154 CYS155 ASN156 ALA157 ASP158 VAL159 PHE160 ALA161 TYR162 ALA163 ALA164 ALA165 LYS166 VAL167 LYS168 LYS169 GLY170 LEU171 GLU172 ILE173 ALA174 LYS175 ARG176 LEU177 GLY178 ALA179 GLU180 ASN181 TYR182 VAL183 PHE184 TRP185 GLY186 GLY187 ARG188 GLU189 GLY190 TYR191 GLU192 THR193 LEU194 LEU195 ASN196 THR197 ASP198 MET199 LYS200 LEU201 GLU202 LEU203 ASP204 ASN205 LEU206 ALA207 ARG208 PHE209 LEU210 HIS211 MET212 ALA213 VAL214 ASP215 TYR216 ALA217 LYS218 GLU219 ILE220 GLY221 PHE222 ASP223 GLY224 GLN225 PHE226 LEU227 ILE228 GLU229 PRO230 LYS231 PRO232 LYS233 GLU234 PRO235 THR236 LYS237 HIS238 GLN239 TYR240 ASP241 PHE242 ASP243 VAL244 ALA245 THR246 ALA247 LEU248 ALA249 PHE250 LEU251 GLN252 THR253 TYR254 GLY255 LEU256 LYS257 ASP258 TYR259 PHE260 LYS261 PHE262 ASN263 ILE264 GLU265 ALA266 ASN267 HIS268 ALA269 THR270 LEU271 ALA272 GLY273 HIS274 THR275 PHE276 GLU277 HIS278 GLU279 LEU280 ARG281 VAL282 ALA283 ARG284 ILE285 HIS286 GLY287 MET288 LEU289 GLY290 SER291 VAL292 ASP293 ALA294 ASN295 GLN296 GLY297 ASP298 MET299 LEU300 LEU301 GLY302 TRP303 ASP304 THR305 ASP306 GLU307 PHE308 PRO309 THR310 ASP311 LEU312 TYR313 SER314 THR315 THR316 LEU317 ALA318 MET319 TYR320 GLU321 ILE322 LEU323 LYS324 ASN325 GLY326 GLY327 LEU328 GLY329 ARG330 GLY331 GLY332 LEU333 ASN334 PHE335 ASP336 ALA337 LYS338 VAL339 ARG340 ARG341 GLY342 SER343 PHE344 GLU345 PRO346 GLU347 ASP348 LEU349 PHE350 TYR351 ALA352 HIS353 ILE354 ALA355 GLY356 MET357 ASP358 SER359 PHE360 ALA361 VAL362 GLY363 LEU364 LYS365 VAL366 ALA367 HIS368 ARG369 LEU370 ILE371 GLU372 ASP373 ARG374 VAL375 PHE376 ASP377 GLU378 PHE379 ILE380 GLU381 GLU382 ARG383 TYR384 LYS385 SER386 TYR387 THR388 GLU389 GLY390 ILE391 GLY392 ARG393 GLU394 ILE395 VAL396 GLU397 GLY398 THR399 ALA400 ASP401 PHE402 HIS403 LYS404 LEU405 GLU406 ALA407 HIS408 ALA409 LEU410 GLN411 LEU412 GLY413 GLU414 ILE415 GLN416 ASN417 GLN418 SER419 GLY420 ARG421 GLN422 GLU423 ARG424 LEU425 LYS426 THR427 LEU428 LEU429 ASN430 GLN431 TYR432 LEU433 LEU434 GLU435 VAL436 CYS437
Unit 4 PRO1 TYR2 PHE3 ASP4 ASN5 ILE6 SER7 THR8 ILE9 ALA10 TYR11 GLU12 GLY13 PRO14 ALA15 SER16 LYS17 ASN18 PRO19 LEU20 ALA21 PHE22 LYS23 PHE24 TYR25 ASN26 PRO27 GLU28 GLU29 LYS30 VAL31 GLY32 ASP33 LYS34 THR35 MET36 GLU37 GLU38 HIS39 LEU40 ARG41 PHE42 SER43 VAL44 ALA45 TYR46 TRP47 HIS48 THR49 PHE50 THR51 GLY52 ASP53 GLY54 SER55 ASP56 PRO57 PHE58 GLY59 ALA60 GLY61 ASN62 MET63 ILE64 ARG65 PRO66 TRP67 ASN68 LYS69 TYR70 SER71 GLY72 MET73 ASP74 LEU75 ALA76 LYS77 ALA78 ARG79 VAL80 GLU81 ALA82 ALA83 PHE84 GLU85 PHE86 PHE87 GLU88 LYS89 LEU90 ASN91 ILE92 PRO93 PHE94 PHE95 CYS96 PHE97 HIS98 ASP99 VAL100 ASP101 ILE102 ALA103 PRO104 GLU105 GLY106 GLU107 THR108 LEU109 LYS110 GLU111 THR112 TYR113 LYS114 ASN115 LEU116 ASP117 ILE118 ILE119 VAL120 ASP121 MET122 ILE123 GLU124 GLU125 TYR126 MET127 LYS128 THR129 SER130 LYS131 THR132 LYS133 LEU134 LEU135 TRP136 ASN137 THR138 ALA139 ASN140 LEU141 PHE142 THR143 HIS144 PRO145 ARG146 PHE147 VAL148 HIS149 GLY150 ALA151 ALA152 THR153 SER154 CYS155 ASN156 ALA157 ASP158 VAL159 PHE160 ALA161 TYR162 ALA163 ALA164 ALA165 LYS166 VAL167 LYS168 LYS169 GLY170 LEU171 GLU172 ILE173 ALA174 LYS175 ARG176 LEU177 GLY178 ALA179 GLU180 ASN181 TYR182 VAL183 PHE184 TRP185 GLY186 GLY187 ARG188 GLU189 GLY190 TYR191 GLU192 THR193 LEU194 LEU195 ASN196 THR197 ASP198 MET199 LYS200 LEU201 GLU202 LEU203 ASP204 ASN205 LEU206 ALA207 ARG208 PHE209 LEU210 HIS211 MET212 ALA213 VAL214 ASP215 TYR216 ALA217 LYS218 GLU219 ILE220 GLY221 PHE222 ASP223 GLY224 GLN225 PHE226 LEU227 ILE228 GLU229 PRO230 LYS231 PRO232 LYS233 GLU234 PRO235 THR236 LYS237 HIS238 GLN239 TYR240 ASP241 PHE242 ASP243 VAL244 ALA245 THR246 ALA247 LEU248 ALA249 PHE250 LEU251 GLN252 THR253 TYR254 GLY255 LEU256 LYS257 ASP258 TYR259 PHE260 LYS261 PHE262 ASN263 ILE264 GLU265 ALA266 ASN267 HIS268 ALA269 THR270 LEU271 ALA272 GLY273 HIS274 THR275 PHE276 GLU277 HIS278 GLU279 LEU280 ARG281 VAL282 ALA283 ARG284 ILE285 HIS286 GLY287 MET288 LEU289 GLY290 SER291 VAL292 ASP293 ALA294 ASN295 GLN296 GLY297 ASP298 MET299 LEU300 LEU301 GLY302 TRP303 ASP304 THR305 ASP306 GLU307 PHE308 PRO309 THR310 ASP311 LEU312 TYR313 SER314 THR315 THR316 LEU317 ALA318 MET319 TYR320 GLU321 ILE322 LEU323 LYS324 ASN325 GLY326 GLY327 LEU328 GLY329 ARG330 GLY331 GLY332 LEU333 ASN334 PHE335 ASP336 ALA337 LYS338 VAL339 ARG340 ARG341 GLY342 SER343 PHE344 GLU345 PRO346 GLU347 ASP348 LEU349 PHE350 TYR351 ALA352 HIS353 ILE354 ALA355 GLY356 MET357 ASP358 SER359 PHE360 ALA361 VAL362 GLY363 LEU364 LYS365 VAL366 ALA367 HIS368 ARG369 LEU370 ILE371 GLU372 ASP373 ARG374 VAL375 PHE376 ASP377 GLU378 PHE379 ILE380 GLU381 GLU382 ARG383 TYR384 LYS385 SER386 TYR387 THR388 GLU389 GLY390 ILE391 GLY392 ARG393 GLU394 ILE395 VAL396 GLU397 GLY398 THR399 ALA400 ASP401 PHE402 HIS403 LYS404 LEU405 GLU406 ALA407 HIS408 ALA409 LEU410 GLN411 LEU412 GLY413 GLU414 ILE415 GLN416 ASN417 GLN418 SER419 GLY420 ARG421 GLN422 GLU423 ARG424 LEU425 LYS426 THR427 LEU428 LEU429 ASN430 GLN431 TYR432 LEU433 LEU434 GLU435 VAL436 CYS437
Ligands
Unit 5 MN491 MN492
Unit 6 MN491 MN492
Unit 7 MN491 MN492
Unit 8 MN491 MN492
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany