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Sequence, Chains, Asymmetric and Biological Units

Title STRUCTURE OF A DNA:RNA HYBRID DUPLEX: WHY RNASE H DOES NOT CLEAVE PURE RNA
Keywords DNA/RNA COMPLEX, DOUBLE HELIX, DNA-RNA HYBRID
Experiment NMR
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   124D     released     available     available     Quaternary Structure Server  
NDB   124D                         


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Other macromolecule   DNA (5'-D(*GP*TP*CP*AP*CP*AP*TP*G)-3')  A 8 253 0
2  RNA    B 8 255 0
total       16 508 0

Nucleic acids
Unit 2 C9 A10 U11 G12 U13 G14 A15 C16

Other macromolecules
Unit 1 DG1 DT2 DC3 DA4 DC5 DA6 DT7 DG8

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany