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(-) Description

Title :  MOLECULAR STRUCTURE OF CYCLIC DEOXYDIADENYLIC ACID AT ATOMIC RESOLUTION
 
Authors :  C. A. Frederick, M. Coll, G. A. Van Der Marel, J. H. Van Boom, A. H. - J. Wang
Date :  19 Jun 91  (Deposition) - 19 Jun 91  (Release) - 21 Sep 01  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.00
Chains :  Asym./Biol. Unit :  A,B,_#
#:   chains that contain no standard or modified protein/DNA/RNA residue)
 
Keywords :  U-Dna, Single Strand, Cyclic (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  C. A. Frederick, M. Coll, G. A. Van Der Marel, J. H. Van Boom, A. H. -J. Wang
Molecular Structure Of Cyclic Deoxydiadenylic Acid At Atomic Resolution
Biochemistry V. 27 8350 1988
PubMed: search
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - DNA (5'-D(*AP*A)-3')
    ChainsA, B
    EngineeredYES

 Structural Features

(-) Chains, Units

  123
Asymmetric/Biological Unit AB_#
#:   chains that contain no standard or modified protein/DNA/RNA residue)
 

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 2)

Asymmetric/Biological Unit (1, 2)
No.NameCountTypeFull Name
1MG2Ligand/IonMAGNESIUM ION

(-) Sites  (0, 0)

(no "Site" information available for UDB012)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for UDB012)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for UDB012)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for UDB012)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for UDB012)

(-) Exons   (0, 0)

(no "Exon" information available for UDB012)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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Chain A from PDB  Type:DNA  Length:2
                                
                 udb012 A 1 AA 2

Chain B from PDB  Type:DNA  Length:2
                                
                 udb012 B 3 AA 4

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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for UDB012)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for UDB012)

(-) Pfam Domains  (0, 0)

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(-) Gene Ontology  (0, 0)

Asymmetric/Biological Unit(hide GO term definitions)
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