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(-) Description

Title :  CRYSTAL STRUCTURE OF THE HUMAN CB1 IN COMPLEX WITH AGONIST AM11542
 
Authors :  T. Hua, K. Vemuri, P. S. Nikas, R. B. Laprairie, Y. Wu, L. Qu, M. Pu, A. Kord J. H. Ho, G. W. Han, K. Ding, X. Li, H. Liu, M. A. Hanson, S. Zhao, L. M. Bohn A. Makriyannis, R. C. Stevens, Z. J. Liu
Date :  08 Jun 17  (Deposition) - 12 Jul 17  (Release) - 12 Jul 17  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.80
Chains :  Asym./Biol. Unit :  A
Keywords :  Membrane Protein, Human G Protein-Coupled Receptor, Stabilizing Agonists, Lipidic Cubic Phase, Signaling Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  T. Hua, K. Vemuri, P. S. Nikas, R. B. Laprairie, Y. Wu, L. Qu, M. Pu, A. Korde, J. Shan, J. H. Ho, G. W. Han, K. Ding, X. Li, H. Liu, M. A. Hanson, S. Zhao, L. M. Bohn, A. Makriyannis, R. C. Stevens, Z. J. Liu
Crystal Structures Of Agonist-Bound Human Cannabinoid Receptor Cb1
Nature 2017
PubMed: search  |  Reference-DOI: 10.1038/NATURE23272

(-) Compounds

Molecule 1 - CANNABINOID RECEPTOR 1,FLAVODOXIN,CANNABINOID RECEPTOR 1
    ChainsA
    EngineeredYES
    Expression SystemHOMO SAPIENS
    Expression System Taxid9606
    FragmentUNP RESIDUES 99-306,UNP RESIDUES 3-148,UNP RESIDUES 332- 414
    GeneCNR1, CNR, DVU_2680
    MutationYES
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS, DESULFOVIBRIO VULGARIS (STRAIN HILDENBOROUGH / ATCC 29579 / DSM 644 / NCIMB 8303)
    Organism Taxid9606, 882
    StrainHILDENBOROUGH / ATCC 29579 / DSM 644 / NCIMB 8303
    SynonymCB1,CANN6,CB1,CANN6

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (6, 8)

Asymmetric/Biological Unit (6, 8)
No.NameCountTypeFull Name
18D31Ligand/Ion(6AR,10AR)-3-(8-BROMANYL-2-METHYL-OCTAN-2-YL)-6,6,9-TRIMETHYL-6A,7,10,10A-TETRAHYDROBENZO[C]CHROMEN-1-OL
2CLR1Ligand/IonCHOLESTEROL
3FMN1Ligand/IonFLAVIN MONONUCLEOTIDE
4OLA2Ligand/IonOLEIC ACID
5OLC2Ligand/Ion(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-ENOATE
6PEG1Ligand/IonDI(HYDROXYETHYL)ETHER

(-) Sites  (0, 0)

(no "Site" information available for 5XRA)

(-) SS Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1A:257 -A:264

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 5XRA)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5XRA)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5XRA)

(-) Exons   (0, 0)

(no "Exon" information available for 5XRA)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
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Chain A from PDB  Type:PROTEIN  Length:428
                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhh..........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.eeeeeee...hhhhhhhhhhhhhhhhh..eeeeee.hhh..........eeeeee............hhhhhhhhhhhhh....eeeeeeee.......hhhhhhhhhhhhhhh.ee....eeee.hhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5xra A  104 DIECFMVLNPSQQLAIAVLSLTLGTFTVLENLLVLCVILHSRSLRCRPSYHFIGSLAVADLLGSVIFVYSFIDFHVFHRKDSRNVFLFKLGGVTASFTASVGSLFLAAIDRYISIHRPLAYKRIVTRPKAVVAFCLMWTIAIVIAVLPLLGWNCEKLQSVCSDIFPHIDKTYLMFWIGVVSVLLLFIVYAYMYILWKAHSHAVAKALIVYGSTTGNTEYTAETIARELADAGYEVDSRDAASVEAGGLFEGFDLVLLGCSTWGDDSIELQDDFIPLFDSLEETGAQGRKVACFGCGDSSWEYFCGAVDAIEEKLKNLGAEIVQDGLRIDGDPRAARDDIVGWAHDVRGAIMDIELAKTLVLILVVLIICWGPLLAIMVYDVFGKMNKLIKTVFAFCSMLCLLNSTVNPIIYALRSKDLRHAFRSMFPS  414
                                   113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303  ||  1008      1018      1028      1038      1048      1058      1068      1078      1088      1098      1108      1118      1128      1138      1148|      346       356       366       376       386       396       406        
                                                                                                                                                                                                                                    306|                                                                                                                                              1148|                                                                             
                                                                                                                                                                                                                                    1002                                                                                                                                                337                                                                             

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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5XRA)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5XRA)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5XRA)

(-) Gene Ontology  (0, 0)

Asymmetric/Biological Unit(hide GO term definitions)
    (no "Gene Ontology" information available for 5XRA)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        CNR1_HUMAN | P215541lvq 1lvr 2b0y 2koe 2mz2 2mz3 2mza 5tgz 5u09 5xr8
        FLAV_DESVH | P003231akq 1akr 1akt 1aku 1akv 1akw 1azl 1bu5 1c7e 1c7f 1f4p 1fx1 1i1o 1j8q 1j9e 1j9g 1wsb 1wsw 1xt6 1xyv 1xyy 2fx2 3fx2 4fx2 5fx2 5tgz 5v56 5v57 5xr8

(-) Related Entries Specified in the PDB File

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