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Title :  SOLUTION STRUCTURE OF A TRNA WITH A LARGE VARIABLE REGION: YEAST TRNA-SER
 
Authors :  A. C. Dock-Bregeon
Date :  01 Feb 90  (Deposition) - 15 Jul 92  (Release) - 01 Apr 03  (Revision)
Method :  THEORETICAL MODEL
Resolution :  NOT APPLICABLE
Chains :  Theor. Model :  A
Keywords :  T-Rna (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  A. C. Dock-Bregeon, E. Westhof, R. Giege, D. Moras
Solution Structure Of A Trna With A Large Variable Region: Yeast Trnaser.
J. Mol. Biol. V. 206 707 1989
PubMed: search
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - T-RNA (85-MER)
    ChainsA
    EngineeredYES
    SyntheticYES

 Structural Features

(-) Chains, Units

  
Theoretical Model 

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (9, 13)

Theoretical Model (9, 13)
No.NameCountTypeFull Name
14AC1Mod. NucleotideN(4)-ACETYLCYTIDINE-5'-MONOPHOSPHATE
25MC1Mod. Nucleotide5-METHYLCYTIDINE-5'-MONOPHOSPHATE
35MU1Mod. Nucleotide5-METHYLURIDINE 5'-MONOPHOSPHATE
46IA1Mod. NucleotideN6-ISOPENTENYL-ADENOSINE-5'-MONOPHOSPHATE
5H2U3Mod. Nucleotide5,6-DIHYDROURIDINE-5'-MONOPHOSPHATE
6M2G1Mod. NucleotideN2-DIMETHYLGUANOSINE-5'-MONOPHOSPHATE
7OMG1Mod. NucleotideO2'-METHYLGUANOSINE-5'-MONOPHOSPHATE
8OMU1Mod. NucleotideO2'-METHYLURIDINE 5'-MONOPHOSPHATE
9PSU3Mod. NucleotidePSEUDOURIDINE-5'-MONOPHOSPHATE

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 Sequence-Structure Mapping

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

Theoretical Model
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:RNA  Length:84
                                                                                                                    
                 5tra A   1 GGCAACUUGGCxGAGugGuuAAGGCgAAAGAuUGAxAuCUUUuGGGCUCUGCCCGcGCAGGuuCAAAUCCUGCAGUUGUCGCCA  76
                                    10 |   || 20     |  30 ||| | |41  |   |47D||||||  52 ||     62        72    
                                      12-4AC| ||     |     ||| | |    | 47A|||||||48-5MC ||                     
                                          16-H2U     |     ||| | |    |  47B|||||||     54-5MU                  
                                           17-OMG    |     ||| | |    |   47C||||||      55-PSU                 
                                             19-H2U  |     ||| | |    |    47D|||||                             
                                              20-H2U |     ||| | |    |     47E||||                             
                                                    26-M2G ||| | |    |      47F|||                             
                                                          32-PSU |    |       47G||                             
                                                           33| | |    |        47H|                             
                                                            35 | |    |         47I                             

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Theoretical Model(hide GO term definitions)
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