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(-) Description

Title :  MONOCLINIC CRYSTAL FORM OF THE EPOB NRPS CYCLIZATION-DOCKING BIDOMAIN FROM SORANGIUM CELLULOSUM
 
Authors :  D. P. Dowling, Y. Kung, A. K. Croft, K. Taghizadeh, W. L. Kelly, C. T. Wals C. L. Drennan
Date :  06 Sep 16  (Deposition) - 09 Nov 16  (Release) - 16 Nov 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.03
Chains :  Asym./Biol. Unit :  A
Keywords :  Epothilone, Nrps, Thiazoline, Cyclization, Biosynthetic Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  D. P. Dowling, Y. Kung, A. K. Croft, K. Taghizadeh, W. L. Kelly, C. T. Walsh, C. L. Drennan
Structural Elements Of An Nrps Cyclization Domain And Its Intermodule Docking Domain.
Proc. Natl. Acad. Sci. Usa V. 113 12432 2016
PubMed-ID: 27791103  |  Reference-DOI: 10.1073/PNAS.1608615113

(-) Compounds

Molecule 1 - EPOB
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: EPOB
    Organism Scientific: SORANGIUM CELLULOSUM
    Organism Taxid: 56

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 5T7Z)

(-) Sites  (0, 0)

(no "Site" information available for 5T7Z)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5T7Z)

(-) Cis Peptide Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1Pro A:179 -Pro A:180

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5T7Z)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5T7Z)

(-) Exons   (0, 0)

(no "Exon" information available for 5T7Z)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
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   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:493
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhh.eeeee..eeeee....hhhhhhhhhhhhhhhhhhhhhhh.......hhhhh...ee.hhhhhhhhhh...........eeeeeeeee..hhhhhhhhhhhhhhhhhhh.eeee...eeee........eeee....hhhhhhhhhhhhhhhhh...........eeeeeee....eeeeeeeee....hhhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhh.hhhhhhhhhhhhhhhh............hhhhh....eeeeeeeehhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhh...eeeeeeee........hhhhh.....eeeeeeee.....hhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhh........eeeee................eeeeeeee.....eeeeeeee..eeeeeeeee....hhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5t7z A   2 AINQLLNELEHQGVKLAADGERLQIQAPALNPNLLARISEHKSTILTMLRQRLPAESIVPAPAERHVPFPLTDIQGSYWLGRTGAFTVPSGIHAYREYDCTDLDVARLSRAFRKVVARHDMLRAHTLPDMMQVIEPKVDADIEIIDLRGLDRSTREARLVSLRDAMSHRIYDTERPPLYHVVAVRLDEQQTRLVLSIDLINVDLGSLSIIFKDWLSFYEDPETSLPVLELSYRDYVLALESRKKSEAHQRSMDYWKRRVAELPPPPMLPMKADPSTLREIRFRHTEQWLPSDSWSRLKQRVGERGLTPTGVILAAFSEVIGRWSASPRFTLNITLFNRLPVHPRVNDITGDFTSMVLLDIDTTRDKSFEQRAKRIQEQLWEAMDHCDVSGIEVQREAARVLGIQGALFPVVLTSALNQQVVGVTSLQRLGTPVYTSTQTPQLLLDHQLYEHDGDLVLAWDIVDGVFPPDLLDDMLEAYVAFLRRLTEEPWSEQ 497
                                    11        21       |33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403   ||  414       424       434       444       454       464       474       484       494   
                                                      29|                                                                                                                                                                                                                                                                                                                                                                                    407|                                                                                        
                                                       32                                                                                                                                                                                                                                                                                                                                                                                     409
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5T7Z)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5T7Z)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5T7Z)

(-) Gene Ontology  (5, 5)

Asymmetric/Biological Unit(hide GO term definitions)

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  Cis Peptide Bonds
    Pro A:179 - Pro A:180   [ RasMol ]  
 

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        Q9KIZ9_SORCE | Q9KIZ9: 5t81

(-) Related Entries Specified in the PDB File

5t81