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(-) Description

Title :  UBE2T IN COMPLEX WITH FRAGMENT EM04
 
Authors :  F. E. Morreale, A. Bortoluzzi, V. K. Chaugule, C. Arkinson, H. Walden, A
Date :  21 Mar 17  (Deposition) - 03 May 17  (Release) - 24 May 17  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.40
Chains :  Asym./Biol. Unit :  A
Keywords :  Ubiquitin-Conjugating Enzyme Ube2T, Fragment Screening, Fanconi Anemia Pathway, Dna Repair, Ligase (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  F. E. Morreale, A. Bortoluzzi, V. K. Chaugule, C. Arkinson, H. Walden, A. Ciulli
Allosteric Targeting Of The Fanconi Anemia Ubiquitin-Conjugating Enzyme Ube2T By Fragment Screening.
J. Med. Chem. V. 60 4093 2017
PubMed-ID: 28437106  |  Reference-DOI: 10.1021/ACS.JMEDCHEM.7B00147

(-) Compounds

Molecule 1 - UBIQUITIN-CONJUGATING ENZYME E2 T
    ChainsA
    EC Number2.3.2.23
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System Taxid562
    GeneUBE2T, HSPC150, PIG50
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606
    SynonymCELL PROLIFERATION-INDUCING GENE 50 PROTEIN,E2 UBIQUITIN- CONJUGATING ENZYME T,UBIQUITIN CARRIER PROTEIN T,UBIQUITIN-PROTEIN LIGASE T

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric/Biological Unit (1, 1)
No.NameCountTypeFull Name
12BG1Ligand/Ion1-(1,3-BENZOTHIAZOL-2-YL)METHANAMINE

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREPHE A:70 , LEU A:71 , PRO A:73 , ILE A:74 , ASP A:80 , SER A:81 , TRP A:146binding site for residue 2BG A 201

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5NGZ)

(-) Cis Peptide Bonds  (2, 2)

Asymmetric/Biological Unit
No.Residues
1Tyr A:61 -Pro A:62
2Pro A:93 -Pro A:94

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5NGZ)

(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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Chain A from PDB  Type:PROTEIN  Length:152
                                                                                                                                                                                        
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhh....eeeee......eeeeeee..........eeeeeee..........eeee................hhhhh...........hhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5ngz A   2 QRASRLKRELHMLATEPPPGITCWQDKDQMDDLRAQILGGANTPYEKGVFKLEVIIPERYPFEPPQIRFLTPIYHPNIDSAGRICLDVLKLPPKGAWRPSLNIATVLTSIQLLMSEPNPDDPLMADISSEFKYNKPAFLKNARQWTEKHARQ 153
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151  

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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5NGZ)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5NGZ)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5NGZ)

(-) Gene Ontology  (23, 23)

Asymmetric/Biological Unit(hide GO term definitions)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        UBE2T_HUMAN | Q9NPD81yh2 4ccg

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 5NGZ)