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(-) Description

Title :  STRUCTURE OF CUTINASE 1 FROM THERMOBIFIDA CELLULOSILYTICA
 
Authors :  A. Hromic, A. Lyskowski, K. Gruber
Date :  08 Sep 16  (Deposition) - 12 Jul 17  (Release) - 12 Jul 17  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.50
Chains :  Asym./Biol. Unit :  A
Keywords :  Cutinases, Poly(Ethyleneterephthlate) (Pet), Polylactic Acid (Pla), Alpha/Beta Hydrolases, Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  D. Ribitsch, A. Hromic, S. Zitzenbacher, B. Zartl, C. Gamerith, A. Pellis, A. Jungbauer, A. Yskowski, G. Steinkellner, K. Gruber, R. Tscheliessnig, E. H. Acero, G. M. Guebitz
Small Cause, Large Effect: Structural Characterization Of Cutinases From Thermobifida Cellulosilytica.
Biotechnol. Bioeng. 2017
PubMed-ID: 28671263  |  Reference-DOI: 10.1002/BIT.26372

(-) Compounds

Molecule 1 - CUTINASE 1
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21(DE3)
    Expression System Taxid: 469008
    Expression System Variant: GOLD
    Expression System Vector: PET26B(+)
    Expression System Vector Type: PLASMID
    Gene: CUT1
    Organism Scientific: THERMOBIFIDA CELLULOSILYTICA
    Organism Taxid: 144786
    Synonym: CUTINASE

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 6)

Asymmetric/Biological Unit (3, 6)
No.NameCountTypeFull Name
1CL3Ligand/IonCHLORIDE ION
2MG2Ligand/IonMAGNESIUM ION
3PEG1Ligand/IonDI(HYDROXYETHYL)ETHER

(-) Sites  (6, 6)

Asymmetric Unit (6, 6)
No.NameEvidenceResiduesDescription
1AC1SOFTWARETRP A:156 , ILE A:179 , CL A:304binding site for residue PEG A 301
2AC2SOFTWAREASP A:175 , ASP A:205 , GLU A:254 , HOH A:485 , HOH A:569 , HOH A:587binding site for residue MG A 302
3AC3SOFTWAREASN A:29 , HOH A:402 , HOH A:404 , HOH A:425 , HOH A:657binding site for residue MG A 303
4AC4SOFTWARETYR A:61 , SER A:131 , MET A:132 , PEG A:301binding site for residue CL A 304
5AC5SOFTWARECYS A:260 , PRO A:261 , HOH A:652binding site for residue CL A 305
6AC6SOFTWARELEU A:176 , THR A:178 , HIS A:209binding site for residue CL A 306

(-) SS Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1A:242 -A:260

(-) Cis Peptide Bonds  (2, 2)

Asymmetric/Biological Unit
No.Residues
1Cys A:242 -Pro A:243
2Cys A:260 -Pro A:261

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5LUI)

(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:264
                                                                                                                                                                                                                                                                                                        
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..........hhhhhhh......eeeeee..........eeeeee.....eeeeeee.....hhhhhhhhhhhhhh...eeeee.......hhhhhhhhhhhhhhhhhhh.hhhhhh.eeeeeeeeeeehhhhhhhhhhhhhh....eeeee...............eeeeee..........hhhhhhhhh.....eeeeee.....hhhhh.hhhhhhhhhhhhhhhhh.hhhhhhhhh..........eeeeee....... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5lui A   2 ANPYERGPNPTDALLEASSGPFSVSEENVSRLSASGFGGGTIYYPRENNTYGAVAISPGYTGTEASIAWLGERIASHGFVVITIDTITTLDQPDSRAEQLNAALNHMINRASSTVRSRIDSSRLAVMGHSMGGGGTLRLASQRPDLKAAIPLTPWHLNKNWSSVTVPTLIIGADLDTIAPVATHAKPFYNSLPSSISKAYLELDGATHFAPNIPNKIIGKYSVAWLKRFVDNDTRYTQFLCPGPRDGLFGEVEEYRSTCPFALE 265
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5LUI)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5LUI)

(-) Pfam Domains  (0, 0)

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(-) Gene Ontology  (0, 0)

Asymmetric/Biological Unit(hide GO term definitions)
    (no "Gene Ontology" information available for 5LUI)

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  Cis Peptide Bonds
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