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(-) Description

Title :  STRUCTURE OF TRANSCRIPTIONAL REGULATORY REPRESSOR PROTEIN - ETHR FROM MYCOBACTERIUM TUBERCULOSIS IN COMPLEX WITH 3-(FURAN-3-YL)-1-(PYRROLIDIN-1-YL)PROPAN-1-ONE AT 1.92A RESOLUTION
 
Authors :  M. Blaszczyk, S. Surade, P. O. Nikiforov, C. Abell, T. L. Blundell
Date :  29 Mar 16  (Deposition) - 29 Mar 17  (Release) - 31 May 17  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.92
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (2x)
Keywords :  Ethr, Transcription, Represor, Boosting Effect (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  P. O. Nikiforov, M. Blaszczyk, S. Surade, H. I. Boshoff, A. Sajid, V. Delorme, N. Deboosere, P. Brodin, A. R. Baulard, C. E. Barry, T. L. Blundell, C. Abell
Fragment-Sized Ethr Inhibitors Exhibit Exceptionally Strong Ethionamide Boosting Effect In Whole-Cell Mycobacterium Tuberculosis Assays.
Acs Chem. Biol. V. 12 1390 2017
PubMed-ID: 28314097  |  Reference-DOI: 10.1021/ACSCHEMBIO.7B00091

(-) Compounds

Molecule 1 - ETHR
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: ETHR_2, ETHR, ETHR_1, AFL40_4013, BN1213_00375, BN1303_02839, ERS007657_00006, ERS007665_03402, ERS007670_00101, ERS007672_00126, ERS007679_01009, ERS007681_01169, ERS007688_00760, ERS007703_00420, ERS007722_01164, ERS007741_02569, ERS013447_02283, ERS013471_02551, ERS023446_02032, ERS024213_01441, ERS024276_01130, ERS027644_00684, ERS027646_02322, ERS027654_00374, ERS027656_00876, ERS031537_01716, ERS075357_02728, ERS075361_00362, ERS075387_01097, ERS124361_02860, IQ38_20160, IQ40_19545, IQ45_19480, IQ47_19420, IU13_19735, IU16_19625
    Organism Scientific: MYCOBACTERIUM TUBERCULOSIS
    Organism Taxid: 1773
    Synonym: MUTANT MONOOXYGENASE ETHR,TETR FAMILY TRANSCRIPTIONAL REGULATOR

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (2x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric Unit (1, 1)
No.NameCountTypeFull Name
16FG1Ligand/Ion3-(FURAN-3-YL)-1-(PYRROLIDIN-1-YL)PROPAN-1-ONE
Biological Unit 1 (1, 2)
No.NameCountTypeFull Name
16FG2Ligand/Ion3-(FURAN-3-YL)-1-(PYRROLIDIN-1-YL)PROPAN-1-ONE

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREPHE A:110 , MET A:142 , THR A:149 , ASN A:176 , ASN A:179binding site for residue 6FG A 301

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5J1R)

(-) Cis Peptide Bonds  (1, 1)

Asymmetric Unit
No.Residues
1Gln A:191 -Pro A:192

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5J1R)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5J1R)

(-) Exons   (0, 0)

(no "Exon" information available for 5J1R)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:193
                                                                                                                                                                                                                                 
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5j1r A  22 GDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPTFYFYFPSKEAVLLTLLDRVVNQADMALQTLAENPADTDRENMWRTGINVFFETFGSHKAVTRAGQAARATSVEVAELWSTFMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMNERTLFASFAGEQPSVPEARVLDTLVHIWVTSIYGE 214
                                    31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5J1R)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5J1R)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5J1R)

(-) Gene Ontology  (7, 7)

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  5j1r
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        ETHR_MYCTU | P9WMC1: 1t56 1u9n 1u9o 3g1l 3g1m 3g1o 3o8g 3o8h 3q0u 3q0v 3q0w 3q3s 3qpl 3sdg 3sfi 3tp0 3tp3 4dw6 4m3b 4m3d 4m3e 4m3f 4m3g 5eyr 5ezg 5ezh 5f04 5f08 5f0c 5f0f 5f0h 5f1j 5f27 5j1u 5j1y 5j3l 5mwo 5mxk

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