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(-) Description

Title :  CRYSTAL STRUCTURE OF THE ZP-N1 DOMAIN OF MOUSE SPERM RECEPTOR ZP2 AT 0.95 A RESOLUTION
 
Authors :  E. Dioguardi, L. Han, K. Nishimura, D. De Sanctis, L. Jovine
Date :  01 Mar 16  (Deposition) - 14 Jun 17  (Release) - 28 Jun 17  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  0.95
Chains :  Asym./Biol. Unit :  A
Keywords :  Cell Adhesion, Fertilization, Egg-Sperm Interaction, Gamete Recognition, Sperm Receptor, Egg Coat, Zona Pellucida, Zp Domain, Zp-N Domain (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  I. Raj, H. Sadat Al Hosseini, E. Dioguardi, K. Nishimura, L. Han, A. Villa, D. De Sanctis, L. Jovine
Structural Basis Of Egg Coat-Sperm Recognition At Fertilization.
Cell V. 169 1315 2017
PubMed-ID: 28622512  |  Reference-DOI: 10.1016/J.CELL.2017.05.033
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - ZONA PELLUCIDA SPERM-BINDING PROTEIN 2
    Chains: A
    Engineered: YES
    Expression System: HOMO SAPIENS
    Expression System Cell Line: HEK-293T
    Expression System Common: HUMAN
    Expression System Taxid: 9606
    Expression System Vector: PHLSEC
    Expression System Vector Type: PLASMID
    Fragment: UNP RESIDUES 35-138
    Gene: ZP2, ZP-2, ZPA
    Mutation: YES
    Organism Common: MOUSE
    Organism Scientific: MUS MUSCULUS
    Organism Taxid: 10090
    Synonym: ZONA PELLUCIDA GLYCOPROTEIN 2,ZP-2,ZONA PELLUCIDA PROTEIN A

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 5II6)

(-) Sites  (0, 0)

(no "Site" information available for 5II6)

(-) SS Bonds  (2, 2)

Asymmetric/Biological Unit
No.Residues
1A:51 -A:134
2A:84 -A:102

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 5II6)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5II6)

(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:100
                                                                                                                                    
               SCOP domains ---------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......eeee....eeee..hhhhhhhhh.eee............eee....eeeehhhhhheee..eeeeeee........eeeeeee........... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------- Transcript
                 5ii6 A  42 NPAFPGTLICDKDEVRIEFSSRFDMEKWNPSVVDTLGSEILSCTYALDLERFVLKFPYETCTIKVVGGYQVNIRVGVRYKDDMYHFFCPAIQLEHHHHHH 146
                                    51        61        71        81        91       101       111     ||126       136       146
                                                                                                     117|                       
                                                                                                      123
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

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(-) CATH Domains  (0, 0)

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(-) Pfam Domains  (0, 0)

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(-) Gene Ontology  (17, 17)

Asymmetric/Biological Unit(hide GO term definitions)

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  5ii6
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  ZP2_MOUSE | P20239
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        ZP2_MOUSE | P20239: 5bup

(-) Related Entries Specified in the PDB File

3d4c
3d4g
3ef7
3nk3
3nk4
5bup RELATED ID: D_1000218079 RELATED DB: PDB RELATED ENTRY UNDER SUBMISSION RELATED ID: D_1000218080 RELATED DB: PDB RELATED ENTRY UNDER SUBMISSION RELATED ID: D_1000218081 RELATED DB: PDB RELATED ENTRY UNDER SUBMISSION