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(-) Description

Title :  CRYSTAL STRUCTURE OF MOUSE CNTN3 FN1-FN3 DOMAINS
 
Authors :  R. M. Nikolaienko, S. Bouyain
Date :  07 Oct 15  (Deposition) - 31 Aug 16  (Release) - 23 Nov 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.82
Chains :  Asym./Biol. Unit :  A
Keywords :  Neural Cell Adhesion Molecule, Fibronectin Type Iii Domains, Cell Adhesion (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  R. M. Nikolaienko, M. Hammel, V. Dubreuil, R. Zalmai, D. R. Hall, N. Mehzabeen, S. J. Karuppan, S. Harroch, S. L. Stella, S. Bouyain
Structural Basis For Interactions Between Contactin Family Members And Protein-Tyrosine Phosphatase Receptor Type G In Neural Tissues.
J. Biol. Chem. V. 291 21335 2016
PubMed-ID: 27539848  |  Reference-DOI: 10.1074/JBC.M116.742163

(-) Compounds

Molecule 1 - CONTACTIN-3
    ChainsA
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System PlasmidPT7HMP
    Expression System StrainBL21(DE3)
    Expression System Taxid469008
    Expression System Vector TypePLASMID
    FragmentFN DOMAINS 1-3, UNP RESIDUES 604-900
    GeneCNTN3, PANG, PCS
    Organism CommonMOUSE
    Organism ScientificMUS MUSCULUS
    Organism Taxid10090
    SynonymBRAIN-DERIVED IMMUNOGLOBULIN SUPERFAMILY PROTEIN 1,BIG-1, PLASMACYTOMA-ASSOCIATED NEURONAL GLYCOPROTEIN

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 5E4Q)

(-) Sites  (0, 0)

(no "Site" information available for 5E4Q)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5E4Q)

(-) Cis Peptide Bonds  (2, 2)

Asymmetric/Biological Unit
No.Residues
1Val A:649 -Pro A:650
2Pro A:756 -Asp A:757

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5E4Q)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5E4Q)

(-) Exons   (0, 0)

(no "Exon" information available for 5E4Q)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:275
                                                                                                                                                                                                                                                                                                                   
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee....eeee..eeeeee.......ee..ee........eeee.......eeeeeeee...........ee.............ee......eeeee....hhhhh.....eeeeeeee......eeeee....eeeee........eeeeeeeeee..eeeee...eeee.............eeee.....eeee......hhhhh...eeeeeee.....eeeee.....eeee.......eeeeeeeeee..ee......eeee... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5e4q A 604 VKVDEITDTTAQLSWSYAVQARTPFSVGWQSVRTVPEVIDGTHTATVVELNPWVEYEFRIVASGGEPSLPSEKVRTEEAAPEIAPSEVSGGGGSRSELVITWDPVPEELQNGGGFGYVVAFRPLGVTTWIQTVVPDNPRYVFRNESIVPFSPYEVKVGVYNNKGEGPFSPVTTVFSAEEEPTVAPSHISAHSLSSSEIEVSWNTIPWKLSNGHLLGYEVRYWNNGGSRKVKVAGNQTSAVLRGLKSNLAYYTAVRAYNSAGAGPFSATVNATTKK 900
                                   613    || 634       644       654||     665       675  ||   689       699       709       719       729       739       749   ||  761       771       781       791       801       811       821       831       841     ||855       865       875       885       895     
                                        618|                      655|                  678|                                                                   753|                                                                                        847|                                                
                                         630                       657                   683                                                                    756                                                                                         852                                                

   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5E4Q)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5E4Q)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5E4Q)

(-) Gene Ontology  (5, 5)

Asymmetric/Biological Unit(hide GO term definitions)

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  Cis Peptide Bonds
    Pro A:756 - Asp A:757   [ RasMol ]  
    Val A:649 - Pro A:650   [ RasMol ]  
 

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  CNTN3_MOUSE | Q07409
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        CNTN3_MOUSE | Q074095e5r 5i99

(-) Related Entries Specified in the PDB File

5e4s 5e52