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(-) Description

Title :  STRUCTURE OF CANDIDA ALBICANS TREHALOSE-6-PHOSPHATE PHOSPHATASE N-TERMINAL DOMAIN
 
Authors :  Y. Miao, R. G. Brennan
Date :  23 Sep 15  (Deposition) - 15 Jun 16  (Release) - 13 Jul 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.56
Chains :  Asym. Unit :  A,B
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  B  (1x)
Keywords :  Trehalose-6-Phosphate Phosphatase, Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  Y. Miao, J. L. Tenor, D. L. Toffaletti, E. J. Washington, J. Liu, W. R. Shadrick, M. A. Schumacher, R. E. Lee, J. R. Perfect, R. G. Brennan
Structures Of Trehalose-6-Phosphate Phosphatase From Pathogenic Fungi Reveal The Mechanisms Of Substrate Recognition And Catalysis.
Proc. Natl. Acad. Sci. Usa V. 113 7148 2016
PubMed-ID: 27307435  |  Reference-DOI: 10.1073/PNAS.1601774113

(-) Compounds

Molecule 1 - TREHALOSE-6-PHOSPHATE PHOSPHATASE
    Chains: A, B
    EC Number: 2.4.1.15
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Fragment: N-TERMINAL DOMAIN (UNP RESIDUES 1-534)
    Gene: TPS2, CAO19.10556, CAO19.3038, I503_00327, W5Q_00328
    Organism Common: YEAST
    Organism Scientific: CANDIDA ALBICANS (STRAIN SC5314 / ATCC MYA- 2876)
    Organism Taxid: 237561
    Strain: SC5314 / ATCC MYA-2876
    Synonym: TREHALOSE-PHOSPHATASE

 Structural Features

(-) Chains, Units

  12
Asymmetric Unit : AB
Biological Unit 1 (1x): A 
Biological Unit 2 (1x):  B

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 5DXF)

(-) Sites  (0, 0)

(no "Site" information available for 5DXF)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5DXF)

(-) Cis Peptide Bonds  (1, 1)

Asymmetric Unit
No.Residues
1Thr A:132 -Pro A:133

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5DXF)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5DXF)

(-) Exons   (0, 0)

(no "Exon" information available for 5DXF)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:460
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......eeeeee............hhhhhhhhhhhhh......eeeee.......hhhhhhhh........eee.......hhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhh....eeeee.hhhhhhhhhhhhhh...eeeee......hhhhhh...hhhhhhhhhh...eeee.hhhhhhhhhhhhhhh...ee...eeee..eeeeeee.....hhhhhhhhhhh...hhhhhhhhhhhhh...eeeeeeee.....hhhhhhhhhhhhhhhhhhhh..eeeeeeee.....hhhhhhhhhhhhhhhhhhhh......eeee....hhhhhhhhhhhh..eee.......hhhhhhhhhhh......eeee..hhhhhh....eee...hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5dxf A   2 APQQVILNVMTSLPLQIIVETVRGNSALYSSQHFLAENKEWETHLIAWTGELEDKSKIEKKLCDASGTPNIHPVWLLRRDQGRWRKYAENVLWPVFHYISDGKAETDAWHDYVKFNEAYLNKIKSVYKPGDIIWIHDYYLLLLPQLLRMEFPNAYIGFFLHVPFPSSEYFRCLSKRSQLLDGMLGADKIGFQSDSFQRHFISCCARVLGCEVNRDSVSAYGTTISVETLPIGIDTEKIEHDAFSSELGVEEKVQALKQVYKGKKLIVGRDRLDKVRGVIQKLEGFEIFLDMYPEWRETVVLIQVSSPGYSHSANVETRVTEIISRINSKYGNLNHTPVLHYQMRVAKEEYLALLRVADLALITSVRDGMNTTSLEFVICQKYNNSPLILSEFTGTATVLKDAIMVNPWDSVGVAKTINDALMLSTKEKVSLESKLYEKVLSNTVQNWTSTFICDILSHSI 528
                                ||  37       |60        70        80        90 ||    124       134       144       154       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       478       488       498       508       518       528
                                6|          45|                               92|                                           163|                                                                                                                                                                                                                                                                                                                                                                        
                                33           59                               117                                            168                                                                                                                                                                                                                                                                                                                                                                        


Chain B from PDB  Type:PROTEIN  Length:468
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..............eeeeeeee........hhhhhhhhhhhhhh...eeeeeee....hhhhhhhhhhh.......eeee.......hhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhh....eeeee.hhhhhhhhhhhhhh...eeeeee.....hhhhhh...hhhhhhhhhh...eeee.hhhhhhhhhhhhhhh...eee..eeee..eeeeeee.....hhhhhhhhhhh...hhhhhhhhhhhhh...eeeeeeee.....hhhhhhhhhhhhhhhh......eeeeeeee.....hhhhhhhhhhhhhhhhhhhh......eeee....hhhhhhhhhhhh.eee........hhhhhhhhhhh......eeee...hhhhhh...eee...hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5dxf B  18 PKEFEGKGKLKLSGRILNVMTSLPLQIVRGNSALYSSQHFLAENKEWETHLIAWTGDEEDKSKIEKKLCDASGTPNIHPVWLLRRDQGRWRKYAENVLWPVFHYIQPSDGKAETDAWHDYVKFNEAYLNKIKSVYKPGDIIWIHDYYLLLLPQLLRMEFPNAYIGFFLHVPFPSSEYFRCLSKRSQLLDGMLGADKIGFQSDSFQRHFISCCARVLGCEVNRDSVSAYGTTISVETLPIGIDTEKIEHDAFSSELGVEEKVQALKQVYKGKKLIVGRDRLDKVRGVIQKLEGFEIFLDMYPEWRETVVLIQVSSPGYSHSANVETRVTEIISRINSKYGNLNHTPVLHYQMRVAKEEYLALLRVADLALITSVRDGMNTTSLEFVICQKYNNSPLILSEFTGTATVLKDAIMVNPWDSVGVAKTINDALMLSTKEKVSLESKLYEKVLSNTVQNWTSTFICDILSHSI 528
                                    27        37      ||64        74        84     ||118       128       138       148       158     ||170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520        
                                                     44|                          90|                                              164|                                                                                                                                                                                                                                                                                                                                                                         
                                                      62                          115                                               167
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5DXF)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5DXF)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5DXF)

(-) Gene Ontology  (12, 12)

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    Thr A:132 - Pro A:133   [ RasMol ]  
 
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  2.4.1.15
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        Q5AI14_CANAL | Q5AI14: 5dxi

(-) Related Entries Specified in the PDB File

5dx9 5dxi 5dxl 5dxn 5dxo