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(-) Description

Title :  BAMACDE COMPLEX, OUTER MEMBRANE BETA-BARREL ASSEMBLY MACHINERY (BAM) COMPLEX
 
Authors :  Y. Gu, N. Paterson, Y. Zeng, H. Dong, W. Wang, C. Dong
Date :  03 Aug 15  (Deposition) - 09 Mar 16  (Release) - 09 Mar 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.50
Chains :  Asym. Unit :  A,C,D,E,F,G,H,I
Biol. Unit 1:  A,C,D,E  (1x)
Biol. Unit 2:  F,G,H,I  (1x)
Keywords :  Outer Membrane Biogenesis, Outer Membrane Beta-Barrel Assembly Machinery Complex, E. Coli, Outer Membrane Insertion. , Protein Transport (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  Y. Gu, H. Li, H. Dong, Y. Zeng, Z. Zhang, N. G. Paterson, P. J. Stansfeld, Z. Wang, Y. Zhang, W. Wang, C. Dong
Structural Basis Of Outer Membrane Protein Insertion By The Bam Complex.
Nature V. 531 47 2016
PubMed-ID: 26901871  |  Reference-DOI: 10.1038/NATURE17199

(-) Compounds

Molecule 1 - OUTER MEMBRANE PROTEIN ASSEMBLY FACTOR BAMA
    Chains: A, F
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: BAMA, YAET, YZZN, YZZY, B0177, JW0172
    Organism Scientific: ESCHERICHIA COLI K-12
    Organism Taxid: 562
    Synonym: OMP85
 
Molecule 2 - OUTER MEMBRANE PROTEIN ASSEMBLY FACTOR BAMC
    Chains: C, G
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: BAMC, DAPX, NLPB, B2477, JW2462
    Organism Scientific: ESCHERICHIA COLI
    Organism Taxid: 562
 
Molecule 3 - OUTER MEMBRANE PROTEIN ASSEMBLY FACTOR BAMD
    Chains: D, H
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: BAMD, YFIO, B2595, JW2577
    Organism Scientific: ESCHERICHIA COLI
    Organism Taxid: 562
 
Molecule 4 - OUTER MEMBRANE PROTEIN ASSEMBLY FACTOR BAME
    Chains: E, I
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: BAME, SMPA, B2617, JW2598
    Organism Scientific: ESCHERICHIA COLI
    Organism Taxid: 562

 Structural Features

(-) Chains, Units

  12345678
Asymmetric Unit : ACDEFGHI
Biological Unit 1 (1x): ACDE    
Biological Unit 2 (1x):     FGHI

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 57)

Asymmetric Unit (1, 57)
No.NameCountTypeFull Name
1MSE57Mod. Amino AcidSELENOMETHIONINE
Biological Unit 1 (1, 30)
No.NameCountTypeFull Name
1MSE30Mod. Amino AcidSELENOMETHIONINE
Biological Unit 2 (1, 27)
No.NameCountTypeFull Name
1MSE27Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (0, 0)

(no "Site" information available for 5D0Q)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5D0Q)

(-) Cis Peptide Bonds  (9, 9)

Asymmetric Unit
No.Residues
1Pro A:92 -Thr A:93
2Glu A:176 -Ile A:177
3Gln A:178 -Gln A:179
4Gly A:431 -Tyr A:432
5Pro A:723 -Phe A:724
6Gly C:72 -Ser C:73
7Asp F:685 -Tyr F:686
8Pro F:723 -Phe F:724
9Gly G:72 -Ser G:73

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5D0Q)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5D0Q)

(-) Exons   (0, 0)

(no "Exon" information available for 5D0Q)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:762
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .....eeee.....hhhhhhhhh........hhhhhhhhhhhhhhh..eeeeeeeee..eeeeeeee...eeeeeee.....hhhhhhhhhhh.........hhhhhhhhhhhhhhhh..........eeeeee.....eeeeee........eeeeeee.....hhhhhhh.....hhhhhhhhhhhhhhhh.....eeeeeeeee......eeeeeeee.....eeeeeeeeee...hhhhhhhhh........hhhhhhhhhhhhhhhhhhh.....eeeeeeee.....eeeeeeeee......eeeeeee.....hhhhhhh..........hhhhhhhhhhhhhhhh.eeeeeeeeee.......eeeeeeeee....ee.................ee...........eeeeee...eeeee..eee........eeeeeeeeeee..........eeeeeeeeeeeeeeee..eeeeeeeeeeeeeee....hhhhhhhhhhhh...........eeeeeeeeeeeeeee..........eeeeeeeeeee.......eeeeeeeeeeeee.......eeeeeeeeeeeee..............................eeee.........................eeeeee....eeeeeeeeeee........eeeeeeeeeeeee.....................eeeeeeeeeeee..eeeeeeeeeeee.........eeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5d0q A  24 FVVKDIHFEGLQRVAVGAALLSmPVRTGDTVNDEDISNTIRALFATGNFEDVRVLRDGDTLLVQVKERPTIASITFSGNKSVKDDmLKQNLEASGVRVGESLDRTTIADIEKGLEDFYYSVGKYSASVKAVVTPLPRNRVDLKLVFQEGVSAEIQQINIVGNHAFTTDELISHFQLQKLAGDLETLRSYYLDRGYARFNIDSTQVSLTPDKKGIYVTVNITEGDQYKLSGVEVSGNLAGHSAEIEQLTKIEPGELYNGTKVTKmEDDIKKLLGRYGYAYPRVQSmPEINDADKTVKLRVNVDAGNRFYVRKIRFEGNDTSKDAVLRREmRQmEGAWLGSDLVDQGKERLNRLGFFETVDTDTQRVPGSPDQVDVVYKVKERNTGSFNFGIGYGTESGVSFQAGVQQDNWLGTGYAVGINGTKNDYQTYAELSVTNPYFTVDGVSLGGRLFYNDFQADDADLSDYTNKSYGTDVTLGFPINEYNSLRAGLGYVHNSLSNmQPQVAmWRYLYSmGEHPSTSDQDNSFKTDDFTFNYGWTYNKLDRGYFPTDGSRVNLTGKVTIPGSDNEYYKVTLDTATYVPIDDDHKWVVLGRTRWGYGDGLGGKEmPFYENFYAGGSSTVRGFQSNTIGPKAVYFPHQASNYDPDYDYECATQDGAKDLCKSDDAVGGNAmAVASLEFITPTPFISNSVRTSFFWDmGTVWDTNWDSSQYSGYPDYSDPSNIRmSAGIALQWmSPLGPLVFSYAQPFKKYDGDKAEQFQFNI 806
                                    33        43  |     53        63        73        83        93       103     | 113       123       133       143       153       163       173       183       193     ||220       230       240       250       260       270       280       290       300   |   310       320    |  330       340       350       360       370 |     380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540    |  550 |     560       570       580       590       600       610       620       630       640     | 650       660       670       680       690       700       710|      720     ||734      |744       754       764   |   774  |    784       794       804  
                                                 46-MSE                                                        109-MSE                                                                                   199|                                                                                    304-MSE              325-MSE                                     369-MSE                                                                                                                                                                   539-MSE |      |                                                                                           646-MSE                                                          711-MSE        726|       741-MSE                    768-MSE  777-MSE                         
                                                                                                                                                                                                          217                                                                                                                                                        372-MSE                                                                                                                                                                      545-MSE  |                                                                                                                                                                            731                                                                           
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         552-MSE                                                                                                                                                                                                                                                      


Chain C from PDB  Type:PROTEIN  Length:316
                                                                                                                                                                                                                                                                                                                                                            
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..............hhhhhh...............................hhhhh..............eeeeee..eeeeee......hhhhhhhhhhhhhh..eee......eeee..ee.........eeeeeeeeeee....eeeeeeeeeeee..ee..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..eee.......eeeee.hhhhhhhhhhhhhhhhheeeeeee....eeeeee...hhhhhh...........eeeeeeeee...eeeeeee.......hhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5d0q C  25 CSSDSRYKRQVSGDEAYLEAAPLAELHAPAGmILPVTSGDYAIPVTNGSGAVGKALDIRPPAQPLALVSGARTQFTGDTASLLVENGRGNTLWPQVVSVLQAKNYTITQRDDAGQTLTTDWVQWNRLDEDEQYRGRYQISVKPQGYQQAVTVKLLNLEQAGKPVADAASmQRYSTEmmNVISAGLDKSATDAANAAQNRADVQSAADDTGLPmLVVRGPFNVVWQRLPAALEKVGmKVTDSTRSQGNmAVTYKPLSDSDWQELGASDPGLASGDYKLQVGDLDNRSSLQFIDPKGHTLTQSQNDALVAVFQAAFSK 344
                                    34        44        54 |      64        74        84        94       104       114       124       134       144       154       164       174       184       194      |204       214       224|      238  |    248       258     | 268       278       288       298       308       318       328       338      
                                                          56-MSE                                                                                                                                   194-MSE  ||                   224|         241-MSE                264-MSE     276-MSE                                                                
                                                                                                                                                                                                          201-MSE                 229                                                                                                                   
                                                                                                                                                                                                           202-MSE                                                                                                                                      


Chain D from PDB  Type:PROTEIN  Length:218
                                                                                                                                                                                                                                                          
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhh..hhhhhh.......hhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5d0q D  26 EVPDNPPNEIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVmYmRGLTNmALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGmLRDYPDTQATRDALPLmENAYRQmQmNAQAEKVAKIIAANSS 243
                                    35        45        55        65        75        85        95       105   | | 115 |     125       135       145       155       165       175       185       195     | 205       215  |    225 |     235        
                                                                                                             109-MSE   |                                                                                 201-MSE          218-MSE  | |                
                                                                                                               111-MSE |                                                                                                         225-MSE              
                                                                                                                     117-MSE                                                                                                       227-MSE            


Chain E from PDB  Type:PROTEIN  Length:87
                                                                                                                       
               SCOP domains --------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...............hhhhhhh.....hhhhhhhhh....ee.....eeeeeee...........eeeeeeee...eeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------- Transcript
                 5d0q E  24 ERVVYRPDINQGNYLTANDVSKIRVGmTQQQVAYALGTPLmSDPFGTNTWFYVFRQQPGHEGVTQQTLTLTFNSSGVLTNIDNKPAL 110
                                    33        43      | 53        63|       73        83        93       103       
                                                     50-MSE        64-MSE                                          


Chain F from PDB  Type:PROTEIN  Length:761
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeee.....hhhhhhhhh........hhhhhhhhhhhhhhh..eeeeeeeee..eeeeeeee...eeeeeee.....hhhhhhhhhhh.........hhhhhhhhhhhhhhhhhhhh....eeeeeeee.....eeeeeeee.........eeee.....hhhhhhh.....hhhhhhhhhhhhhhhh.....eeeeeeeee......eeeeeeee.....eeeeeeeeee...hhhhhhhhh........hhhhhhhhhhhhhhhhhhhh....eeeeeeee.....eeeeeeeee.....eeeeeeee.....hhhhhhh..........hhhhhhhhhhhhhhhh.eeeeeeeeee......eeeeeeeeee....ee.................ee...........eeeeee....eeee..eee........eeeeeeeeeee..........eeeeeeeeeeeeeeee..eeeeeeeeeeeeeee....hhhhhhhhhhhh...........eeeeeeeeeeeeeee..........eeeeeeeeeee.......eeeeeeeeeeeee.......eeeeeeeeeeeee..............................eeee.........................eeeeee....eeeeeeeeeee.......eeeeeeeeeeeee.....................eeeeeeeeeeee..eeeeeeeeeeee.........eeeee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5d0q F  25 VVKDIHFEGLQRVAVGAALLSmPVRTGDTVNDEDISNTIRALFATGNFEDVRVLRDGDTLLVQVKERPTIASITFSGNKSVKDDmLKQNLEASGVRVGESLDRTTIADIEKGLEDFYYSVGKYSASVKAVVTPLPRNRVDLKLVFQEGVSAEIQQINIVGNHAFTTDELISHFQLQKLAGDLETLRSYYLDRGYARFNIDSTQVSLTPDKKGIYVTVNITEGDQYKLSGVEVSGNLAGHSAEIEQLTKIEPGELYNGTKVTKmEDDIKKLLGRYGYAYPRVQSmPEINDADKTVKLRVNVDAGNRFYVRKIRFEGNDTSKDAVLRREmRQmEGAWLGSDLVDQGKERLNRLGFFETVDTDTQRVPGSPDQVDVVYKVKERNTGSFNFGIGYGTESGVSFQAGVQQDNWLGTGYAVGINGTKNDYQTYAELSVTNPYFTVDGVSLGGRLFYNDFQADDADLSDYTNKSYGTDVTLGFPINEYNSLRAGLGYVHNSLSNmQPQVAmWRYLYSmGEHPSTSDQDNSFKTDDFTFNYGWTYNKLDRGYFPTDGSRVNLTGKVTIPGSDNEYYKVTLDTATYVPIDDDHKWVVLGRTRWGYGDGLGGKEmPFYENFYAGGSSTVRGFQSNTIGPKAVYFPHQASNYDPDYDYECATQDGAKDLCKSDDAVGGNAmAVASLEFITPTPFINSVRTSFFWDmGTVWDTNWDSSQYSGYPDYSDPSNIRmSAGIALQWmSPLGPLVFSYAQPFKKYDGDKAEQFQFNIG 807
                                    34        44 |      54        64        74        84        94       104    |  114       124       134       144       154       164       174       184       194    || 221       231       241       251       261       271       281       291       301  |    311       321   |   331       341       351       361       371|      381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541   |   551|      561       571       581       591       601       611       621       631       641    |  651       661       671       681       691       701       711       721   ||  736    |  746       756       766 |     776|      786       796       806 
                                                46-MSE                                                        109-MSE                                                                                   199|                                                                                    304-MSE              325-MSE                                     369-MSE                                                                                                                                                                   539-MSE |      |                                                                                           646-MSE                                                          711-MSE       725|       741-MSE                    768-MSE  777-MSE                          
                                                                                                                                                                                                         217                                                                                                                                                        372-MSE                                                                                                                                                                      545-MSE  |                                                                                                                                                                           731                                                                            
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        552-MSE                                                                                                                                                                                                                                                      


Chain G from PDB  Type:PROTEIN  Length:86
                                                                                                                      
               SCOP domains -------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........hhhhhhh.............................................hhhhhh.....hhhhhh....... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------- Transcript
                 5d0q G  28 DSRYKRQVSGDEAYLEAAPLAELHAPAGmILPVTSGDYAIPVTNGSGAVGKALDIRPPAQPADAASmQRYSTEmmNVISAGLDKSA 213
                                    37        47        57        67        77        87||    |197   ||  207      
                                                       56-MSE                          88|    |      ||           
                                                                                       189    |      ||           
                                                                                            194-MSE  ||           
                                                                                                   201-MSE        
                                                                                                    202-MSE       


Chain H from PDB  Type:PROTEIN  Length:218
                                                                                                                                                                                                                                                          
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhh..hhhhhh.......hhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5d0q H  26 EVPDNPPNEIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVmYmRGLTNmALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGmLRDYPDTQATRDALPLmENAYRQmQmNAQAEKVAKIIAANSS 243
                                    35        45        55        65        75        85        95       105   | | 115 |     125       135       145       155       165       175       185       195     | 205       215  |    225 |     235        
                                                                                                             109-MSE   |                                                                                 201-MSE          218-MSE  | |                
                                                                                                               111-MSE |                                                                                                         225-MSE              
                                                                                                                     117-MSE                                                                                                       227-MSE            


Chain I from PDB  Type:PROTEIN  Length:87
                                                                                                                       
               SCOP domains --------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...............hhhhhhh.....hhhhhhhhhh...........eeeeee...........eeeeeeee...eeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------- Transcript
                 5d0q I  24 ERVVYRPDINQGNYLTANDVSKIRVGmTQQQVAYALGTPLmSDPFGTNTWFYVFRQQPGHEGVTQQTLTLTFNSSGVLTNIDNKPAL 110
                                    33        43      | 53        63|       73        83        93       103       
                                                     50-MSE        64-MSE
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5D0Q)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5D0Q)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5D0Q)

(-) Gene Ontology  (15, 34)

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  Cis Peptide Bonds
    Asp F:685 - Tyr F:686   [ RasMol ]  
    Gln A:178 - Gln A:179   [ RasMol ]  
    Glu A:176 - Ile A:177   [ RasMol ]  
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    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)
  BAME_ECOLI | P0A937
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)

 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        BAMA_ECOLI | P0A940: 2qcz 2qdf 2v9h 3efc 3og5 3q6b 4c4v 4n75 4pk1 4xga 5ayw 5d0o 5ekq 5ljo
        BAMC_ECOLI | P0A903: 2lae 2laf 2yh5 2yh6 3sns 3tgo 5ayw 5d0o 5ekq 5ljo
        BAMD_ECOLI | P0AC02: 2yhc 3q5m 3tgo 5ayw 5d0o 5ekq 5ljo
        BAME_ECOLI | P0A937: 2km7 2kxx 2yh9 5ayw 5d0o 5ekq 5ljo

(-) Related Entries Specified in the PDB File

5d0o