Show PDB file:   
         Plain Text   HTML   (compressed file size)
QuickSearch:   
by PDB,NDB,UniProt,PROSITE Code or Search Term(s)  
(-)Asymmetric Unit
(-)Asym. Unit - sites
(-)Biological Unit 1
(-)Biol. Unit 1 - sites
(-)Biological Unit 2
collapse expand < >
Image Asymmetric Unit
Asymmetric Unit  (Jmol Viewer)
Image Asym. Unit - sites
Asym. Unit - sites  (Jmol Viewer)
Image Biological Unit 1
Biological Unit 1  (Jmol Viewer)
Image Biol. Unit 1 - sites
Biol. Unit 1 - sites  (Jmol Viewer)
Image Biological Unit 2
Biological Unit 2  (Jmol Viewer)

(-) Description

Title :  CRYSTAL STRUCTURE OF CO-CAO1 IN COMPLEX WITH RESVERATROL
 
Authors :  X. Sui, K. Palczewski, S. Banerjee, P. D. Kiser
Date :  15 Dec 16  (Deposition) - 31 May 17  (Release) - 21 Jun 17  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.90
Chains :  Asym. Unit :  A,B,C,D
Biol. Unit 1:  A,D  (1x)
Biol. Unit 2:  B,C  (1x)
Keywords :  Carotenoid Cleavage Oxygenase Beta Propeller Dioxygenase, Carotenoid Oxygenase, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  X. Sui, A. C. Weitz, E. R. Farquhar, M. Badiee, S. Banerjee, J. Von Lintig, G. P. Tochtrop, K. Palczewski, M. P. Hendrich, P. D. Kiser
Structure And Spectroscopy Of Alkene-Cleaving Dioxygenases Containing An Atypically Coordinated Non-Heme Iron Center.
Biochemistry V. 56 2836 2017
PubMed-ID: 28493664  |  Reference-DOI: 10.1021/ACS.BIOCHEM.7B00251

(-) Compounds

Molecule 1 - CAROTENOID OXYGENASE 1
    Chains: A, B, C, D
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: CAO-1, NCU07008
    Organism Scientific: NEUROSPORA CRASSA (STRAIN ATCC 24698 / 74-OR23- 1A / CBS 708.71 / DSM 1257 / FGSC 987)
    Organism Taxid: 367110
    Strain: ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987

 Structural Features

(-) Chains, Units

  1234
Asymmetric Unit : ABCD
Biological Unit 1 (1x): A  D
Biological Unit 2 (1x):  BC 

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 24)

Asymmetric Unit (3, 24)
No.NameCountTypeFull Name
1CO4Ligand/IonCOBALT (II) ION
2DMS10Ligand/IonDIMETHYL SULFOXIDE
3STL10Ligand/IonRESVERATROL
Biological Unit 1 (2, 12)
No.NameCountTypeFull Name
1CO-1Ligand/IonCOBALT (II) ION
2DMS5Ligand/IonDIMETHYL SULFOXIDE
3STL7Ligand/IonRESVERATROL
Biological Unit 2 (2, 8)
No.NameCountTypeFull Name
1CO-1Ligand/IonCOBALT (II) ION
2DMS5Ligand/IonDIMETHYL SULFOXIDE
3STL3Ligand/IonRESVERATROL

(-) Sites  (24, 24)

Asymmetric Unit (24, 24)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREHIS A:197 , HIS A:248 , HIS A:313 , HIS A:510 , HOH A:797binding site for residue CO A 601
02AC2SOFTWAREPHE A:91 , TYR A:133 , THR A:151 , LYS A:164 , GLU A:165 , HIS A:248 , GLY A:312 , HIS A:313 , PHE A:337 , GLU A:383 , PHE A:384 , PRO A:425 , STL A:605 , HOH A:706 , HOH A:876binding site for residue STL A 602
03AC3SOFTWAREGLU A:478 , ASP A:479 , MET A:480 , HOH A:715 , GLU D:478binding site for residue DMS A 603
04AC4SOFTWARETYR A:137 , THR A:138 , LYS A:272 , GLN A:273 , GLY A:274binding site for residue DMS A 604
05AC5SOFTWAREASN A:41 , PHE A:338 , TRP A:339 , GLY A:423 , PRO A:425 , STL A:602binding site for residue STL A 605
06AC6SOFTWARELYS A:144 , HOH A:711 , TYR C:282 , ASP C:342 , ASN C:344 , LYS C:346binding site for residue STL A 606
07AC7SOFTWAREGLU A:414 , MET A:417binding site for residue STL A 607
08AC8SOFTWAREHIS B:197 , HIS B:248 , HIS B:313 , HIS B:510 , HOH B:734binding site for residue CO B 601
09AC9SOFTWAREPHE B:91 , TYR B:133 , THR B:151 , LYS B:164 , GLU B:165 , HIS B:248 , GLY B:312 , HIS B:313 , PHE B:337 , GLU B:383 , PHE B:384 , PRO B:425 , HOH B:840 , HOH B:949binding site for residue STL B 602
10AD1SOFTWARETYR B:155 , ASP B:515 , ASP B:518binding site for residue DMS B 603
11AD2SOFTWARELYS B:215 , TRP B:238binding site for residue DMS B 604
12AD3SOFTWARELEU B:444 , THR B:493 , GLU B:495binding site for residue DMS B 605
13AD4SOFTWAREASP D:412 , ARG D:448 , STL D:607binding site for residue DMS B 606
14AD5SOFTWAREGLU B:478 , ASP B:479 , MET B:480 , HOH B:749 , ASP C:479binding site for residue DMS B 607
15AD6SOFTWAREHIS C:197 , HIS C:248 , HIS C:313 , HIS C:510 , HOH C:786binding site for residue CO C 601
16AD7SOFTWAREPHE C:91 , TYR C:133 , THR C:151 , LYS C:164 , GLU C:165 , HIS C:248 , GLY C:312 , HIS C:313 , PHE C:337 , GLU C:383 , PHE C:384 , PRO C:425 , HOH C:770 , HOH C:886binding site for residue STL C 602
17AD8SOFTWAREASP A:184 , GLY A:187 , LEU A:189 , PRO A:190 , LEU A:192 , LYS A:215 , SER C:283 , HOH C:1016binding site for residue STL C 603
18AD9SOFTWAREHIS D:197 , HIS D:248 , HIS D:313 , HIS D:510 , HOH D:761binding site for residue CO D 601
19AE1SOFTWAREPHE D:91 , TYR D:133 , THR D:151 , LYS D:164 , GLU D:165 , HIS D:248 , GLY D:312 , HIS D:313 , PHE D:337 , GLU D:383 , PHE D:384 , PRO D:425 , STL D:606 , HOH D:811 , HOH D:963binding site for residue STL D 602
20AE2SOFTWAREASP D:515 , ASP D:518 , VAL D:519 , HOH D:861binding site for residue DMS D 603
21AE3SOFTWAREARG B:220 , VAL B:240 , CYS D:266 , HOH D:867binding site for residue DMS D 604
22AE4SOFTWAREHIS D:356 , TYR D:376binding site for residue DMS D 605
23AE5SOFTWAREPHE D:338 , TRP D:339 , GLY D:423 , ALA D:424 , PRO D:425 , STL D:602binding site for residue STL D 606
24AE6SOFTWAREGLU B:305 , LEU B:371 , DMS B:606 , PRO D:408 , GLY D:409binding site for residue STL D 607

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5U90)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 5U90)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5U90)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5U90)

(-) Exons   (0, 0)

(no "Exon" information available for 5U90)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:497
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .........hhhhhhhhh....eeee...eeee.......eeeeeeee...........hhhhh.eeeeeeeee..eeeeeeee..hhhhhhhhhhh........hhhhh............eeeee..eeeee......eee......eeee................ee......eeeee.........eeeeeee.....eeeeeeee....ee....ee...eeeee.eeee.hhhhhhh.....ee.....eeeeeee....hhhhheeeee...eeeeeeeeee.....eeeeeeee......................eeeeeeee............ee.....eeeee.hhhhh.....eeeeee........hhhhhhhhhh.......eeeeee.....eeee.....eee...eeee.........eeeeeeeee....eeeeeeee.hhh..eeeeee..........eeeee........... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5u90 A  30 LPPAPRYFQGENTAGFMRPVRFEGDITNLEVVGEIPKSIEGTFYRVMPEPHLPSFIPNDPWFNGDGNISGFYFKDGHVDLKQRYVRTEKFVREAEARRSLLGKYRNRYTDLVEFKIRSTANTNIVYWRGQLLALKEDSPPYAMDPETLETFGVYDFDGQLPSLTFTAHPKFDPVTREMVCFGYEAKGDGTRDICYYSFGPDGKIAETVWLVSPVCGMIHDFAVTENFVIFPIIPLVCDVERMKQGGDHWQWDYSIPMYIGVLPRRGAQGSDVKWFEAPHGFAGHVANAFEDDKGHIQLQMAYAKDNVFFWWPDANGKGPRPGEVEAHFANFVLDYQSDKLPLAEPTYLVDDDMEFPRIDDRVATRKHKHTFFCIFDRKPGVTDFEFVMPRAGGGAPMSNGLAHLNHETGDIQRYLPGPRKLTGECIFIPRNSEAAEGDGYVMVLLANYEDMCSELAVLDTKDLTNEVALIKLPVRLRPGLHGNWVDKSDVDGHPAPL 526
                                    39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459       469       479       489       499       509       519       


Chain B from PDB  Type:PROTEIN  Length:497
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .........hhhhhhhhh....eeee...eeee.......eeeeeeee...........hhhhh.eeeeeeeee..eeeeeeee..hhhhhhhhhhh........hhhhh............eeeee..eeeee......eee......eeee................ee......eeeee.........eeeeeee.....eeeeeeee....ee....ee...eeeee.eeee.hhhhhhh.....ee.....eeeeeee....hhhhheeeee...eeeeeeeeee.....eeeeeeee......................eeeeeeee............ee.....eeeeee.hhhh.....eeeeee........hhhhhhhhhh.......eeeeee.....eeee.....eee...eeee.........eeeeeeeee....eeeeeeee.hhh..eeeeee..........eeeee........... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5u90 B  30 LPPAPRYFQGENTAGFMRPVRFEGDITNLEVVGEIPKSIEGTFYRVMPEPHLPSFIPNDPWFNGDGNISGFYFKDGHVDLKQRYVRTEKFVREAEARRSLLGKYRNRYTDLVEFKIRSTANTNIVYWRGQLLALKEDSPPYAMDPETLETFGVYDFDGQLPSLTFTAHPKFDPVTREMVCFGYEAKGDGTRDICYYSFGPDGKIAETVWLVSPVCGMIHDFAVTENFVIFPIIPLVCDVERMKQGGDHWQWDYSIPMYIGVLPRRGAQGSDVKWFEAPHGFAGHVANAFEDDKGHIQLQMAYAKDNVFFWWPDANGKGPRPGEVEAHFANFVLDYQSDKLPLAEPTYLVDDDMEFPRIDDRVATRKHKHTFFCIFDRKPGVTDFEFVMPRAGGGAPMSNGLAHLNHETGDIQRYLPGPRKLTGECIFIPRNSEAAEGDGYVMVLLANYEDMCSELAVLDTKDLTNEVALIKLPVRLRPGLHGNWVDKSDVDGHPAPL 526
                                    39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459       469       479       489       499       509       519       


Chain C from PDB  Type:PROTEIN  Length:501
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .............hhhhhhhhh....eeee...eeee.......eeeeeeee...........hhhhh.eeeeeeeee..eeeeeeee..hhhhhhhhhhh........hhhhh............eeeee..eeeee......eee......eeee................ee......eeeee.........eeeeeee.....eeeeeeee....ee....ee...eeeee.eeee.hhhhhhh.....ee.....eeeeeee....hhhhheeeee...eeeeeeeeee.....eeeeeeee......................eeeeeeee............ee.....eeeeee.hhhh.....eeeeee........hhhhhhhhhh.......eeeeee.....eeee.....eee...eeee.........eeeeeeeee....eeeeeeee..eeeeeeeeee..........eeeee........... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5u90 C  26 QPEELPPAPRYFQGENTAGFMRPVRFEGDITNLEVVGEIPKSIEGTFYRVMPEPHLPSFIPNDPWFNGDGNISGFYFKDGHVDLKQRYVRTEKFVREAEARRSLLGKYRNRYTDLVEFKIRSTANTNIVYWRGQLLALKEDSPPYAMDPETLETFGVYDFDGQLPSLTFTAHPKFDPVTREMVCFGYEAKGDGTRDICYYSFGPDGKIAETVWLVSPVCGMIHDFAVTENFVIFPIIPLVCDVERMKQGGDHWQWDYSIPMYIGVLPRRGAQGSDVKWFEAPHGFAGHVANAFEDDKGHIQLQMAYAKDNVFFWWPDANGKGPRPGEVEAHFANFVLDYQSDKLPLAEPTYLVDDDMEFPRIDDRVATRKHKHTFFCIFDRKPGVTDFEFVMPRAGGGAPMSNGLAHLNHETGDIQRYLPGPRKLTGECIFIPRNSEAAEGDGYVMVLLANYEDMCSELAVLDTKDLTNEVALIKLPVRLRPGLHGNWVDKSDVDGHPAPL 526
                                    35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445       455       465       475       485       495       505       515       525 


Chain D from PDB  Type:PROTEIN  Length:497
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .........hhhhhhhhh....eeee...eeee.......eeeeeeee...........hhhhh.eeeeeeeee..eeeeeeee..hhhhhhhhhhh........hhhhh............eeeee..eeeee......eee......eeee................ee......eeeee.........eeeeeee.....eeeeeeee....ee....ee...eeeee.eeee.hhhhhhh.....ee.....eeeeeee....hhhhheeeee...eeeeeeeeee.....eeeeeeee......................eeeeeeee............ee.....eeeeee.hhhh.....eeeeee........hhhhhhhhhh.......eeeeee.....eeee.....eee...eeee.........eeeeeeeee....eeeeeeee.hhh..eeeeee..........eeeee........... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5u90 D  30 LPPAPRYFQGENTAGFMRPVRFEGDITNLEVVGEIPKSIEGTFYRVMPEPHLPSFIPNDPWFNGDGNISGFYFKDGHVDLKQRYVRTEKFVREAEARRSLLGKYRNRYTDLVEFKIRSTANTNIVYWRGQLLALKEDSPPYAMDPETLETFGVYDFDGQLPSLTFTAHPKFDPVTREMVCFGYEAKGDGTRDICYYSFGPDGKIAETVWLVSPVCGMIHDFAVTENFVIFPIIPLVCDVERMKQGGDHWQWDYSIPMYIGVLPRRGAQGSDVKWFEAPHGFAGHVANAFEDDKGHIQLQMAYAKDNVFFWWPDANGKGPRPGEVEAHFANFVLDYQSDKLPLAEPTYLVDDDMEFPRIDDRVATRKHKHTFFCIFDRKPGVTDFEFVMPRAGGGAPMSNGLAHLNHETGDIQRYLPGPRKLTGECIFIPRNSEAAEGDGYVMVLLANYEDMCSELAVLDTKDLTNEVALIKLPVRLRPGLHGNWVDKSDVDGHPAPL 526
                                    39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459       469       479       489       499       509       519
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5U90)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5U90)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5U90)

(-) Gene Ontology  (2, 2)

Asymmetric Unit(hide GO term definitions)

 Visualization

(-) Interactive Views

Asymmetric Unit
  Complete Structure
    Jena3D(integrated viewing of ligand, site, SAP, PROSITE, SCOP information)
    WebMol | AstexViewer[tm]@PDBe
(Java Applets, require no local installation except for Java; loading may be slow)
    STRAP
(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    RasMol
(require local installation)
    Molscript (VRML)
(requires installation of a VRML viewer; select preferred view via VRML and generate a mono or stereo PDF format file)
 
  Ligands, Modified Residues, Ions
    CO  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    DMS  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    STL  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
 
  Sites
    AC1  [ RasMol ]  +environment [ RasMol ]
    AC2  [ RasMol ]  +environment [ RasMol ]
    AC3  [ RasMol ]  +environment [ RasMol ]
    AC4  [ RasMol ]  +environment [ RasMol ]
    AC5  [ RasMol ]  +environment [ RasMol ]
    AC6  [ RasMol ]  +environment [ RasMol ]
    AC7  [ RasMol ]  +environment [ RasMol ]
    AC8  [ RasMol ]  +environment [ RasMol ]
    AC9  [ RasMol ]  +environment [ RasMol ]
    AD1  [ RasMol ]  +environment [ RasMol ]
    AD2  [ RasMol ]  +environment [ RasMol ]
    AD3  [ RasMol ]  +environment [ RasMol ]
    AD4  [ RasMol ]  +environment [ RasMol ]
    AD5  [ RasMol ]  +environment [ RasMol ]
    AD6  [ RasMol ]  +environment [ RasMol ]
    AD7  [ RasMol ]  +environment [ RasMol ]
    AD8  [ RasMol ]  +environment [ RasMol ]
    AD9  [ RasMol ]  +environment [ RasMol ]
    AE1  [ RasMol ]  +environment [ RasMol ]
    AE2  [ RasMol ]  +environment [ RasMol ]
    AE3  [ RasMol ]  +environment [ RasMol ]
    AE4  [ RasMol ]  +environment [ RasMol ]
    AE5  [ RasMol ]  +environment [ RasMol ]
    AE6  [ RasMol ]  +environment [ RasMol ]
 
  Cis Peptide Bonds
(no "Cis Peptide Bonds" information available for 5u90)
 
Biological Units
  Complete Structure
    Biological Unit 1  [ Jena3D ]
    Biological Unit 2  [ Jena3D ]

(-) Still Images

Jmol
  protein: cartoon or spacefill or dots and stick; nucleic acid: cartoon and stick; ligands: spacefill; active site: stick
[ Asym. Unit PNG format | Asym. Unit - sites PNG format | Biol. Unit 1 PNG format | Biol. Unit 1 - sites PNG format | Biol. Unit 2 PNG format ](automatic orientation, automatically generated)
Molscript
  protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick
[ mono PDF format | stereo PDF format ](default orientation, automatically generated)

 Databases and Analysis Tools

(-) Databases

Access by PDB/NDB ID
  5u90
    Family and Domain Information: ProDom | SYSTERS
    General Structural Information: GlycoscienceDB | MMDB | NDB | OCA | PDB | PDBe | PDBj | PDBsum | PDBWiki | PQS | PROTEOPEDIA
    Orientation in Membranes: OPM
    Protein Surface: SURFACE
    Secondary Structure: DSSP (structure derived) | HSSP (homology derived)
    Structural Genomics: GeneCensus
    Structural Neighbours: CE | VAST
    Structure Classification: CATH | Dali | SCOP
    Validation and Original Data: BMRB Data View | BMRB Restraints Grid | EDS | PROCHECK | RECOORD | WHAT_CHECK
 
Access by UniProt ID/Accession number
  Q7S860_NEUCR | Q7S860
    Comparative Protein Structure Models: ModBase
    Genomic Information: Ensembl
    Protein-protein Interaction: DIP
    Sequence, Family and Domain Information: InterPro | Pfam | SMART | UniProtKB/SwissProt
 
Access by Enzyme Classificator   (EC Number)
  (no 'Enzyme Classificator' available)
    General Enzyme Information: BRENDA | EC-PDB | Enzyme | IntEnz
    Pathway: KEGG | MetaCyc
 
Access by Disease Identifier   (MIM ID)
  (no 'MIM ID' available)
    Disease Information: OMIM
 
Access by GenAge ID
  (no 'GenAge ID' available)
    Age Related Information: GenAge

(-) Analysis Tools

Access by PDB/NDB ID
    Domain Information: XDom
    Interatomic Contacts of Structural Units: CSU
    Ligand-protein Contacts: LPC
    Protein Cavities: castP
    Sequence and Secondary Structure: PDBCartoon
    Structure Alignment: STRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    Structure and Sequence Browser: STING
 
Access by UniProt ID/Accession number
  Q7S860_NEUCR | Q7S860
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)

 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        Q7S860_NEUCR | Q7S860: 5u8x 5u8y 5u8z 5u97

(-) Related Entries Specified in the PDB File

5u8z 5u97