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(-) Description

Title :  TTK KINASE DOMAIN IN COMPLEX WITH TC-MPS1-12
 
Authors :  J. Uitdehaag, N. Willemsen-Seegers, J. De Man, R. C. Buijsman, G. J. R.
Date :  24 Feb 17  (Deposition) - 31 May 17  (Release) - 05 Jul 17  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.10
Chains :  Asym./Biol. Unit :  A
Keywords :  Kinase, Inhibitor, Mitosis, Mps1, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  J. C. M. Uitdehaag, J. De Man, N. Willemsen-Seegers, M. B. W. Prinsen, M. A. A. Libouban, J. G. Sterrenburg, J. J. P. De Wit, J. R. F. De Vetter J. A. D. M. De Roos, R. C. Buijsman, G. J. R. Zaman
Target Residence Time-Guided Optimization On Ttk Kinase Results In Inhibitors With Potent Anti-Proliferative Activity.
J. Mol. Biol. V. 429 2211 2017
PubMed-ID: 28539250  |  Reference-DOI: 10.1016/J.JMB.2017.05.014

(-) Compounds

Molecule 1 - DUAL SPECIFICITY PROTEIN KINASE TTK
    ChainsA
    EC Number2.7.12.1
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System Taxid562
    GeneTTK, MPS1, MPS1L1
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606
    SynonymPHOSPHOTYROSINE PICKED THREONINE-PROTEIN KINASE,PYT

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 2)

Asymmetric/Biological Unit (2, 2)
No.NameCountTypeFull Name
18QE1Ligand/Ion4-[[4-AZANYL-6-(~{TERT}-BUTYLAMINO)-5-CYANO-PYRIDIN-2-YL]AMINO]BENZAMIDE
2TPO1Mod. Amino AcidPHOSPHOTHREONINE

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREILE A:531 , ALA A:551 , MET A:602 , GLU A:603 , CYS A:604 , ASN A:606 , ILE A:607 , ASP A:608 , SER A:611 , LEU A:654 , ILE A:663 , MET A:671binding site for residue 8QE A 901

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5N93)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 5N93)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5N93)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5N93)

(-) Exons   (0, 0)

(no "Exon" information available for 5N93)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:260
                                                                                                                                                                                                                                                                                                    
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeee..eeeeeeeeeeee..eeeeeee.....eeeeeeee....hhhhhhhhhhhhhhhhhhh........eeeeee...eeeeee....eehhhhhhh....hhhhhhhhhhhhhhhhhhhhhh.......hhh.eeee..eeee.........ee........hhhhhhh....hhhhhhhhhhhhhhhhhh.........hhhhhhhhhhh...........hhhhhhhhhhhh........hhhhhh.hhhhhh. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5n93 A 516 QSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDVGtVNYMPPEAIKDMSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQ 794
                                   525       535       545       555       565       575       585       595       605       615       625       635       645       655       665       684 |     694   ||  714       724       734       744       754       764       774       784       794
                                                                                                                                                                                        674| |         698|                                                                                     
                                                                                                                                                                                         684 |          709                                                                                     
                                                                                                                                                                                           686-TPO                                                                                              

   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5N93)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5N93)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5N93)

(-) Gene Ontology  (21, 21)

Asymmetric/Biological Unit(hide GO term definitions)

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  TTK_HUMAN | P33981
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        TTK_HUMAN | P339812x9e 2zmc 2zmd 3cek 3dbq 3gfw 3h9f 3hmn 3hmo 3hmp 3vqu 3w1f 3wyx 3wyy 3wzj 3wzk 4b94 4bhz 4bi0 4bi1 4bi2 4c4e 4c4f 4c4g 4c4h 4c4i 4c4j 4cv8 4cv9 4cva 4d2s 4h7x 4h7y 4js8 4jt3 4o6l 4zeg 5ap0 5ap1 5ap2 5ap3 5ap4 5ap5 5ap6 5ap7 5eh0 5ehl 5eho 5ehy 5ei2 5ei6 5ei8 5ljj 5n7v 5n84 5n87 5n9s 5na0 5nad

(-) Related Entries Specified in the PDB File

5n7v DETERMINED UNDER SIMILAR EXPERIMENTAL CONDITIONS