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(-) Description

Title :  STRUCTURE THE PROPROTEIN CONVERTASE FURIN IN COMPLEX WITH META-GUANIDINOMETHYL-PHAC-RVR-AMBA AT 2.0 ANGSTROM RESOLUTION.
 
Authors :  S. O. Dahms, M. Arciniega, T. Steinmetzer, R. Huber, M. E. Than
Date :  13 May 16  (Deposition) - 05 Oct 16  (Release) - 19 Oct 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.00
Chains :  Asym./Biol. Unit :  A,H
Keywords :  Protease, Inhibitor, Proteolysis, Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  S. O. Dahms, M. Arciniega, T. Steinmetzer, R. Huber, M. E. Than
Structure Of The Unliganded Form Of The Proprotein Convertase Furin Suggests Activation By A Substrate-Induced Mechanism.
Proc. Natl. Acad. Sci. Usa V. 113 11196 2016
PubMed-ID: 27647913  |  Reference-DOI: 10.1073/PNAS.1613630113

(-) Compounds

Molecule 1 - FURIN
    ChainsA
    EC Number3.4.21.75
    EngineeredYES
    Expression SystemHOMO SAPIENS
    Expression System Cell LineHEK293
    Expression System CommonHUMAN
    Expression System Taxid9606
    GeneFURIN, FUR, PACE, PCSK3
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606
    SynonymDIBASIC-PROCESSING ENZYME,PAIRED BASIC AMINO ACID RESIDUE- CLEAVING ENZYME,PACE
 
Molecule 2 - 2UC-ARG-VAL-ARG-00S
    ChainsH
    EngineeredYES
    Organism ScientificSYNTHETIC CONSTRUCT
    Organism Taxid32630
    SyntheticYES

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit AH

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (5, 10)

Asymmetric/Biological Unit (5, 10)
No.NameCountTypeFull Name
100S1Mod. Amino Acid4-(AMINOMETHYL)BENZENECARBOXIMIDAMIDE
22UC1Mod. Amino Acid1-[3-(2-OXOETHYL)BENZYL]GUANIDINE
3CA3Ligand/IonCALCIUM ION
4CL1Ligand/IonCHLORIDE ION
5NA4Ligand/IonSODIUM ION

(-) Sites  (8, 8)

Asymmetric Unit (8, 8)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREASP A:174 , ASP A:179 , ASP A:181 , HOH A:780 , HOH A:859 , HOH A:1131binding site for residue CA A 601
2AC2SOFTWAREASP A:115 , ASP A:162 , VAL A:205 , ASN A:208 , VAL A:210 , GLY A:212binding site for residue CA A 602
3AC3SOFTWAREASP A:258 , ASP A:301 , GLU A:331 , HOH A:815 , HOH A:856 , HOH A:973binding site for residue CA A 603
4AC4SOFTWARETHR A:309 , SER A:311 , THR A:314 , HOH A:830binding site for residue NA A 604
5AC5SOFTWARESER A:279 , GLY A:284 , HOH A:726 , HOH A:848 , HOH A:1135 , HOH A:1155binding site for residue NA A 605
6AC6SOFTWARESER A:544 , HOH A:781binding site for residue NA A 606
7AC7SOFTWAREASP A:264 , HOH A:898 , HOH A:907 , HOH A:1012 , HOH A:1138 , HOH A:1210binding site for residue NA A 607
8AC8SOFTWAREARG A:276 , TYR A:313 , LYS A:449 , TYR A:571binding site for residue CL A 608

(-) SS Bonds  (3, 3)

Asymmetric/Biological Unit
No.Residues
1A:211 -A:360
2A:303 -A:333
3A:450 -A:474

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 5JXH)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5JXH)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5JXH)

(-) Exons   (0, 0)

(no "Exon" information available for 5JXH)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:473
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........hhhhh...........hhhhhhhh.......eeeeee..............hhhhhee...............hhhhhhhhhhhhhhh...............eeeeee......hhhhhhhhhh.......eeee..............hhhhhhhhhhhhhhhhhhh..eeeee...hhhhh.hhhhh.......eeeeeee.................eeee.........eeeee...eeeeee.hhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhh..........ee.....ee.........hhhhhhhhhh........eeeeee.....ee...eeeeeeee...........eeeeeeeeeeeee.hhh.eeeeee.....eeeee...........eeeeeeee.........eeeeeeeee.......eeeeeeeeeeeee........ Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5jxh A 109 VYQEPTDPKFPQQWYLSGVTQRDLNVKAAWAQGYTGHGIVVSILDDGIEKNHPDLAGNYDPGASFDVNDQDPDPQPRYTQMNDNRHGTRCAGEVAAVANNGVCGVGVAYNARIGGVRMLDGEVTDAVEARSLGLNPNHIHIYSASWGPEDDGKTVDGPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREHDSCNCDGYTNSIYTLSISSATQFGNVPWYSEACSSTLATTYSSGNQNEKQIVTTDLRQKCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTSKPAHLNANDWATNGVGRKVSHSYGYGLLDAGAMVALAQNWTTVAPQRKCIIDILTEPKDIGKRLEVRKTVTACLGEPNHITRLEHAQARLTLSYNRRGDLAIHLVSPMGTRSTLLAARPHDYSADGFNDWAFMTTHSWDEDPSGEWVLEIENTSEANNYGTLTKFTLVLYGTASGSLVPR 581
                                   118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       478       488       498       508       518       528       538       548       558       568       578   

Chain H from PDB  Type:PROTEIN  Length:5
                                     
               SCOP domains ----- SCOP domains
               CATH domains ----- CATH domains
               Pfam domains ----- Pfam domains
         Sec.struct. author ..... Sec.struct. author
                 SAPs(SNPs) ----- SAPs(SNPs)
                    PROSITE ----- PROSITE
                 Transcript ----- Transcript
                 5jxh H   1 xRVRx   5
                            |   |
                            1-2UC
                                5-00S

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5JXH)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5JXH)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5JXH)

(-) Gene Ontology  (54, 54)

Asymmetric/Biological Unit(hide GO term definitions)

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  Cis Peptide Bonds
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        FURIN_HUMAN | P099584omc 4omd 4ryd 4z2a 5jmo 5jxg 5jxi 5jxj 5mim

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 5JXH)