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(-) Description

Title :  STRUCTURE OF THE UNLIGANDED FORM OF THE PROPROTEIN CONVERTASE FURIN.
 
Authors :  S. O. Dahms, M. Arciniega, T. Steinmetzer, R. Huber, M. E. Than
Date :  13 May 16  (Deposition) - 05 Oct 16  (Release) - 19 Oct 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.80
Chains :  Asym./Biol. Unit :  A
Keywords :  Protease, Apo-Structure, Proteolysis, Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  S. O. Dahms, M. Arciniega, T. Steinmetzer, R. Huber, M. E. Than
Structure Of The Unliganded Form Of The Proprotein Convertase Furin Suggests Activation By A Substrate-Induced Mechanism.
Proc. Natl. Acad. Sci. Usa V. 113 11196 2016
PubMed-ID: 27647913  |  Reference-DOI: 10.1073/PNAS.1613630113

(-) Compounds

Molecule 1 - FURIN
    ChainsA
    EC Number3.4.21.75
    EngineeredYES
    Expression SystemHOMO SAPIENS
    Expression System Cell LineHEK293S
    Expression System CommonHUMAN
    Expression System Taxid9606
    GeneFURIN, FUR, PACE, PCSK3
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606
    SynonymDIBASIC-PROCESSING ENZYME,PAIRED BASIC AMINO ACID RESIDUE- CLEAVING ENZYME,PACE

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 12)

Asymmetric/Biological Unit (3, 12)
No.NameCountTypeFull Name
1CA3Ligand/IonCALCIUM ION
2CL1Ligand/IonCHLORIDE ION
3NA8Ligand/IonSODIUM ION

(-) Sites  (12, 12)

Asymmetric Unit (12, 12)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREASP A:174 , ASP A:179 , ASP A:181 , HOH A:751 , HOH A:786 , HOH A:1187binding site for residue CA A 601
02AC2SOFTWAREASP A:115 , ASP A:162 , VAL A:205 , ASN A:208 , VAL A:210 , GLY A:212binding site for residue CA A 602
03AC3SOFTWAREASP A:258 , ASP A:301 , GLU A:331 , HOH A:838 , HOH A:991 , HOH A:1110binding site for residue CA A 603
04AC4SOFTWARETHR A:309 , SER A:311 , THR A:314 , SER A:316 , HOH A:871binding site for residue NA A 604
05AC5SOFTWAREASP A:264 , GLY A:265 , NA A:606 , NA A:610 , HOH A:824 , HOH A:874 , HOH A:1175 , HOH A:1242binding site for residue NA A 605
06AC6SOFTWARENA A:605 , HOH A:824 , HOH A:874 , HOH A:928 , HOH A:1242 , HOH A:1278 , HOH A:1304binding site for residue NA A 606
07AC7SOFTWARESER A:279 , GLY A:284 , HOH A:733 , HOH A:765 , HOH A:1008 , HOH A:1213 , HOH A:1244binding site for residue NA A 607
08AC8SOFTWARESER A:544 , HOH A:823binding site for residue NA A 608
09AC9SOFTWAREGLU A:546 , HOH A:1063 , HOH A:1177binding site for residue NA A 609
10AD1SOFTWAREASP A:264 , NA A:605 , HOH A:850 , HOH A:1168 , HOH A:1175 , HOH A:1239binding site for residue NA A 610
11AD2SOFTWARETHR A:413 , HOH A:840 , HOH A:907 , HOH A:947 , HOH A:1173 , HOH A:1289binding site for residue NA A 611
12AD3SOFTWAREARG A:276 , TYR A:313 , LYS A:449 , TYR A:571binding site for residue CL A 612

(-) SS Bonds  (3, 3)

Asymmetric/Biological Unit
No.Residues
1A:211 -A:360
2A:303 -A:333
3A:450 -A:474

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 5JXG)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5JXG)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5JXG)

(-) Exons   (0, 0)

(no "Exon" information available for 5JXG)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:473
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........hhhhh...........hhhhhhhh.......eeeeee..............hhhhhee..................hhhhhhhhhhhh...............eeeeee......hhhhhhhhhh.......eeee..............hhhhhhhhhhhhhhhhhhh..eeeee...hhhhh.hhhhh.......eeeeeee.................eeee.........eeeee...eeeeee.hhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhh..........ee.....ee.........hhhhhhhhhh........eeeeee.....ee...eeeeeeee...........eeeeeeeeeeeee.hhh.eeeeee.....eeeee...........eeeeeeee.........eeeeeeeee.......eeeeeeeeeeeee........ Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5jxg A 109 VYQEPTDPKFPQQWYLSGVTQRDLNVKAAWAQGYTGHGIVVSILDDGIEKNHPDLAGNYDPGASFDVNDQDPDPQPRYTQMNDNRHGTRCAGEVAAVANNGVCGVGVAYNARIGGVRMLDGEVTDAVEARSLGLNPNHIHIYSASWGPEDDGKTVDGPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREHDSCNCDGYTNSIYTLSISSATQFGNVPWYSEACSSTLATTYSSGNQNEKQIVTTDLRQKCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTSKPAHLNANDWATNGVGRKVSHSYGYGLLDAGAMVALAQNWTTVAPQRKCIIDILTEPKDIGKRLEVRKTVTACLGEPNHITRLEHAQARLTLSYNRRGDLAIHLVSPMGTRSTLLAARPHDYSADGFNDWAFMTTHSWDEDPSGEWVLEIENTSEANNYGTLTKFTLVLYGTASGSLVPR 581
                                   118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       478       488       498       508       518       528       538       548       558       568       578   

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5JXG)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5JXG)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5JXG)

(-) Gene Ontology  (54, 54)

Asymmetric/Biological Unit(hide GO term definitions)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        FURIN_HUMAN | P099584omc 4omd 4ryd 4z2a 5jmo 5jxh 5jxi 5jxj 5mim

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 5JXG)