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(-) Description

Title :  CALCIUM-LOADED EF-HAND DOMAIN OF L-PLASTIN
 
Authors :  H. Ishida, K. V. Jensen, G. W. Woodman, M. E. Hyndman, H. J. Vogel
Date :  02 May 16  (Deposition) - 19 Apr 17  (Release) - 19 Apr 17  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (30x)
NMR Structure *:  A  (1x)
Keywords :  Calcium-Binding, Ef-Hand, L-Plastin, Metal Binding Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  H. Ishida, K. V. Jensen, A. G. Woodman, M. E. Hyndman, H. J. Vogel
The Calcium-Dependent Switch Helix Of L-Plastin Regulates Actin Bundling.
Sci Rep V. 7 40662 2017
PubMed-ID: 28145401  |  Reference-DOI: 10.1038/SREP40662

(-) Compounds

Molecule 1 - PLASTIN-2
    ChainsA
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System Taxid562
    FragmentEF-HAND DOMAIN (UNP RESIDUE 1-97)
    GeneLCP1, PLS2
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606
    SynonymL-PLASTIN,LC64P,LYMPHOCYTE CYTOSOLIC PROTEIN 1,LCP-1

 Structural Features

(-) Chains, Units

  1
NMR Structure (30x)A
NMR Structure * (1x)A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 2)

NMR Structure (1, 2)
No.NameCountTypeFull Name
1CA2Ligand/IonCALCIUM ION
NMR Structure * (0, 0)
No.NameCountTypeFull Name
1CA-1Ligand/IonCALCIUM ION

(-) Sites  (2, 2)

NMR Structure (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREASP A:22 , ASP A:24 , ASN A:26 , TYR A:28 , GLU A:33binding site for residue CA A 101
2AC2SOFTWAREASP A:62 , ASP A:64 , ASP A:66 , ARG A:68 , GLU A:73binding site for residue CA A 102

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5JOJ)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 5JOJ)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5JOJ)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5JOJ)

(-) Exons   (0, 0)

(no "Exon" information available for 5JOJ)

(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:97
                                                                                                                                
               SCOP domains ------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......hhhhhhhhhhhhhhhh.....eehhhhhhhhhhhh....hhhhhhhhhhhhhhh........eehhhhhhhhhhh..hhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------- Transcript
                  5joj A  1 MARGSVSDEEMMELREAFAKVDTDGNGYISFNELNDLFKAACLPLPGYRVREITENLMATGDLDQDGRISFDEFIKIFHGLKSTDVAKTFRKAINKK 97
                                    10        20        30        40        50        60        70        80        90       

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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5JOJ)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5JOJ)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5JOJ)

(-) Gene Ontology  (34, 34)

NMR Structure(hide GO term definitions)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        PLSL_HUMAN | P137962d85 5jol

(-) Related Entries Specified in the PDB File

5jol