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(-) Description

Title :  MELK IN COMPLEX WITH NVS-MELK12B
 
Authors :  E. R. Sprague, T. Brazell
Date :  29 Feb 16  (Deposition) - 01 Jun 16  (Release) - 08 Jun 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.14
Chains :  Asym./Biol. Unit :  A
Keywords :  Kinase Uba Domain Inhibitor, Transferase-Transferase Inhibitor Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  B. B. Toure, J. Giraldes, T. Smith, E. R. Sprague, Y. Wang, S. Mathieu, Z. Chen, Y. Mishina, Y. Feng, Y. Yan-Neale, S. Shakya, D. Chen, M. Meyer D. Puleo, J. T. Brazell, C. Straub, D. Sage, K. Wright, Y. Yuan, X. Chen, J. Duca, S. Kim, L. Tian, E. Martin, K. Hurov, W. Shao
Toward The Validation Of Maternal Embryonic Leucine Zipper Kinase: Discovery, Optimization Of Highly Potent And Selective Inhibitors, And Preliminary Biology Insight.
J. Med. Chem. V. 59 4711 2016
PubMed-ID: 27187609  |  Reference-DOI: 10.1021/ACS.JMEDCHEM.6B00052

(-) Compounds

Molecule 1 - MATERNAL EMBRYONIC LEUCINE ZIPPER KINASE
    ChainsA
    EC Number2.7.11.1
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System StrainBL21(DE3)
    Expression System Taxid469008
    GeneMELK, KIAA0175
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606
    SynonymHMELK,PROTEIN KINASE EG3,PEG3 KINASE,PROTEIN KINASE PK38, HPK38,TYROSINE-PROTEIN KINASE MELK

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric/Biological Unit (1, 1)
No.NameCountTypeFull Name
16BB1Ligand/Ion4-[1-(2-FLUOROPHENYL)-1H-PYRAZOL-4-YL]-3-[(PIPERIDIN-4-YL)METHOXY]PYRIDINE

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREMET A:2 , ILE A:17 , LEU A:27 , ALA A:38 , LEU A:86 , GLU A:87 , TYR A:88 , CYS A:89 , PRO A:90 , GLU A:93 , LEU A:139 , HOH A:533binding site for residue 6BB A 401

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5IHC)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 5IHC)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5IHC)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5IHC)

(-) Exons   (0, 0)

(no "Exon" information available for 5IHC)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:305
                                                                                                                                                                                                                                                                                                                                                 
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhh.eeeeeeee..eeeeeee.....eeeeeeeehhhhh.hhhhhhhhhhhhhh........eeeeee...eeeeee.....eehhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhh.......hhh.eee.....eee....hhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhh........hhhhhhhhhhhh..hhhhh.hhhhhhhhhhhhh.................hhhhhhhhhh....hhhhhhhhhhh...hhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5ihc A   2 MDYDELLKYYELHETIGTAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLFDEYHKLKLIDFGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVPKWLSPSSILLLQQMLQVDPKKRISMKNLLNHPWIMQDYNYPVEWQSKNPFIHLDDDCVTELSVHHRNNRQTMEDLISLWQYDHLTATYLLLLAKKARG 327
                                    11       |24        34        44        54        64        74        84        94       104       114       124       134       144       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322     
                                            19|                                                                                                                              152|                                                                                                                                                            
                                             23                                                                                                                               171                                                                                                                                                            

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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5IHC)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5IHC)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5IHC)

(-) Gene Ontology  (28, 28)

Asymmetric/Biological Unit(hide GO term definitions)

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  MELK_HUMAN | Q14680
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        MELK_HUMAN | Q146804bky 4bkz 4bl1 4d2p 4d2t 4d2v 4d2w 4ixp 4ump 4umq 4umr 4umt 4umu 5ih8 5ih9 5iha 5k00

(-) Related Entries Specified in the PDB File

5hi8 5hi9 5iha