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(-) Description

Title :  STRUCTURE OF EF-HAND CONTAINING PROTEIN
 
Authors :  K. R. Park, M. S. Kwon, J. Y. An, J. G. Lee, H. S. Youn, Y. Lee, J. Y. Kang, T. G J. J. Lim, J. S. Park, S. H. Lee, W. K. Song, H. Cheong, C. Jun, S. H. Eom
Date :  09 Feb 16  (Deposition) - 28 Dec 16  (Release) - 28 Dec 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.85
Chains :  Asym./Biol. Unit :  A
Keywords :  Calcium Binding Protein, Metal Binding Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  K. R. Park, M. S. Kwon, J. Y. An, J. G. Lee, H. S. Youn, Y. Lee, J. Y. Kang, T. G. Kim, J. J. Lim, J. S. Park, S. H. Lee, W. K. Song, H. K. Cheong, C. D. Jun, S. H. Eom
Structural Implications Of Ca(2+)-Dependent Actin-Bundling Function Of Human Efhd2/Swiprosin-1.
Sci Rep V. 6 39095 2016
PubMed-ID: 27974828  |  Reference-DOI: 10.1038/SREP39095

(-) Compounds

Molecule 1 - EF-HAND DOMAIN-CONTAINING PROTEIN D2
    ChainsA
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System PlasmidPET28A
    Expression System StrainBL21(DE3)
    Expression System Taxid469008
    Expression System Vector TypePLASMID
    FragmentUNP RESIDUES 70-184
    GeneEFHD2, SWS1
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606
    SynonymSWIPROSIN-1

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 2)

Asymmetric/Biological Unit (1, 2)
No.NameCountTypeFull Name
1CA2Ligand/IonCALCIUM ION

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREASP A:105 , ASP A:109 , PHE A:111 , GLU A:116 , HOH A:332 , HOH A:387binding site for residue CA A 201
2AC2SOFTWAREASP A:141 , ASP A:143 , ASP A:145 , LYS A:147 , GLU A:152 , HOH A:319binding site for residue CA A 202

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5I2L)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 5I2L)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5I2L)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5I2L)

(-) Exons   (0, 0)

(no "Exon" information available for 5I2L)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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Chain A from PDB  Type:PROTEIN  Length:105
                                                                                                                                         
               SCOP domains --------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhh...hhhhhhhhhhhhhhhh.....eehhhhhhhhhhhhh...hhhhhhhhhhhhh......eehhhhhhhhhhhhh......hhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------- Transcript
                 5i2l A  80 FNPYTEFKEFSRKQIKDMEKMFKQYDAGRDGFIDLMELKLMMEKLGAPQTHLGLKNMIKEVDEDFDSKLSFREFLLIFRKAAAGELQEDSGLCVLARLSEIDVSS 184
                                    89        99       109       119       129       139       149       159       169       179     

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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5I2L)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5I2L)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5I2L)

(-) Gene Ontology  (4, 4)

Asymmetric/Biological Unit(hide GO term definitions)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        EFHD2_HUMAN | Q96C195i2o 5i2q

(-) Related Entries Specified in the PDB File

5i2o 5i2q