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(-) Description

Title :  CRYSTAL STRUCTURE OF HNRNPA2B1 IN OMPLEX WITH 10-MER RNA
 
Authors :  B. X. Wu, S. C. Su, J. H. Gan, J. B. Ma
Date :  19 Jan 16  (Deposition) - 08 Feb 17  (Release) - 01 Mar 17  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.85
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Hnrnpa2B1, Rrms, Rna Binding Protein-Rna Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  B. X. Wu, S. C. Su, J. H. Gan, J. B. Ma
Structure Basis For Rna-Binding Properties Of The Rna Recognition Motifs Of Hnrnpa2B1
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEINS A2/B1
    ChainsA
    EngineeredYES
    FragmentUNP RESIDUES 15-193
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606
    SynonymHNRNP A2/B1
    SyntheticYES
 
Molecule 2 - RNA (5'-R(*AP*AP*GP*GP*AP*CP*UP*AP*GP*C)-3')
    ChainsB
    EngineeredYES
    Organism ScientificSYNTHETIC CONSTRUCT
    Organism Taxid32630
    SyntheticYES

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 5HO4)

(-) Sites  (0, 0)

(no "Site" information available for 5HO4)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5HO4)

(-) Cis Peptide Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1Arg A:82 -Pro A:83

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5HO4)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5HO4)

(-) Exons   (0, 0)

(no "Exon" information available for 5HO4)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:179
                                                                                                                                                                                                                   
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhh.eeeee......hhhhhhhhhhhhh.eeeeeeee......eeeeeeeee.hhhhhhhhhhh...ee..ee.eeee..hhhhh..........eeeee......hhhhhhhhhhhhh.eeeeeeee......eeeeeeeee..hhhhhhhh...eeee..eeeeeee....... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5ho4 A  15 REKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSRQEM 193
                                    24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184         

Chain B from PDB  Type:DNA/RNA  Length:10
                                          
                 5ho4 B   1 AAGGACUAGC  10
                                    10

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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5HO4)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5HO4)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5HO4)

(-) Gene Ontology  (30, 30)

Asymmetric/Biological Unit(hide GO term definitions)

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  Cis Peptide Bonds
    Arg A:82 - Pro A:83   [ RasMol ]  
 

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 Related Entries

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UniProtKB/Swiss-Prot
        ROA2_HUMAN | P226261x4b 5en1

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