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(-) Description

Title :  CRYSTAL STRUCTURE OF OSH1 ANK DOMAIN FROM KLUYVEROMYCES LACTIS
 
Authors :  Y. J. Im, M. K. Manik, H. S. Yang, J. S. Tong
Date :  14 Oct 16  (Deposition) - 10 May 17  (Release) - 10 May 17  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.90
Chains :  Asym. Unit :  A,B
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  B  (1x)
Biol. Unit 3:  A,B  (1x)
Keywords :  Oxysterol Binding, Lipid Transfer, Ank Nvj1, Lipid Binding Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  M. K. Manik, H. Yang, J. Tong, Y. J. Im
Structure Of Yeast Osbp-Related Protein Osh1 Reveals Key Determinants For Lipid Transport And Protein Targeting At The Nucleus-Vacuole Junction
Structure V. 25 617 2017
PubMed-ID: 28319008  |  Reference-DOI: 10.1016/J.STR.2017.02.010

(-) Compounds

Molecule 1 - KLLA0C04147P
    Chains: A, B
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21(DE3)
    Expression System Plasmid: MODIFED PHIS-2
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Fragment: UNP RESIDUES 10-274
    Gene: KLLA0_C04147G
    Organism Common: YEAST
    Organism Scientific: KLUYVEROMYCES LACTIS
    Organism Taxid: 284590
    Strain: ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37

 Structural Features

(-) Chains, Units

  12
Asymmetric Unit : AB
Biological Unit 1 (1x): A 
Biological Unit 2 (1x):  B
Biological Unit 3 (1x): AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 5H2A)

(-) Sites  (0, 0)

(no "Site" information available for 5H2A)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5H2A)

(-) Cis Peptide Bonds  (2, 2)

Asymmetric Unit
No.Residues
1Gln A:43 -Pro A:44
2Gln B:43 -Pro B:44

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5H2A)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5H2A)

(-) Exons   (0, 0)

(no "Exon" information available for 5H2A)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:271
                                                                                                                                                                                                                                                                                                               
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........hhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh................hhhhhhhhh.hhhhhhhhhh..............hhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhh...........hhhhhhhhh.hhhhhhhhhh.............hhhhhh...hhhhh.hhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5h2a A   4 GSAMGSTVSVSKPLLKLKLLDCLRQSNFQQLCHLIANEFQPFDEPTVRSVFELILHYAVQVSPASLIKDIVQNWTTKGSSNSQLFIDVNKQDQDGNTPLHLAAFQSRGDVVTVLMNHPDINDCILNDAHLQPIEMCKNLNIAQMMQVARANYVAEIAQEFRQAFNNRDIDHLNSILSNPRNQELLDINGMEPETGDTVLHEFVKKRDILLCRWILDHGGDPFKRDSRGKLPIDLLKKVSSKEQNDKKNAIDLELKKMLEKAAREQSVIDVT 274
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273 


Chain B from PDB  Type:PROTEIN  Length:257
                                                                                                                                                                                                                                                                                                 
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........hhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....................hhhhhhhhh.hhhhhhhhhh..............hhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhh...........hhhhhhhhh.hhhhhhhhhhh............hhhhhh....hhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5h2a B   4 GSAMGSTVSVSKPLLKLKLLDCLRQSNFQQLCHLIANEFQPFDEPTVRSVFELILHYAVQVSPASLIKDIVQNWTTKGSSNSQLFIDVNKQDQDGNTPLHLAAFQSRGDVVTVLMNHPDINDCILNDAHLQPIEMCKNLNIAQMMQVARANYVAEIAQEFRQAFNNRDIDHLNSILSNPRNQELLDINGMEPETGDTVLHEFVKKRDILLCRWILDHGGDPFKRDSRGKLPIDLLKKVKNAIDLELKKMLEKAAREQ 268
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       251       261       
                                                                                                                                                                                                                                                                       241|                  
                                                                                                                                                                                                                                                                        250
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5H2A)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5H2A)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5H2A)

(-) Gene Ontology  (0, 0)

Asymmetric Unit(hide GO term definitions)
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  Cis Peptide Bonds
    Gln A:43 - Pro A:44   [ RasMol ]  
    Gln B:43 - Pro B:44   [ RasMol ]  
 
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 Related Entries

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        Q6CUK7_KLULA | Q6CUK7: 5h2d 5wvr

(-) Related Entries Specified in the PDB File

5h2b 5h2c 5h2d