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(-) Description

Title :  TGF-BETA RECEPTOR TYPE 2 KINASE DOMAIN (E431A,R433A,E485A,K488A,R493A, R495A) IN COMPLEX WITH 3-AMINO-6-[4-(2- HYDROXYETHYL)PHENYL]-N-[4-(MORPHOLIN-4-YL)PYRIDIN-3-YL] PYRAZINE-2-CARBOXAMIDE
 
Authors :  S. Sheriff
Date :  14 Oct 15  (Deposition) - 11 May 16  (Release) - 11 May 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.42
Chains :  Asym./Biol. Unit :  A
Keywords :  Kinase Domain, Transferase-Transferase Inhibitor Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. J. Tebben, M. Ruzanov, M. Gao, D. Xie, S. E. Kiefer, C. Yan, J. A. Newitt, L. Zhang, K. Kim, L. Hao, L. M. Kopcho, S. Sheriff
Crystal Structures Of Apo And Inhibitor-Bound Tgfbetar2 Kinase Domain: Insights Into Tgfbetar Isoform Selectivity
Acta Crystallogr. , Sect. D V. 72 658 2016
PubMed: search  |  Reference-DOI: 10.1107/S2059798316003624

(-) Compounds

Molecule 1 - TGF-BETA RECEPTOR TYPE-2
    Chains: A
    EC Number: 2.7.11.30
    Engineered: YES
    Expression System: SPODOPTERA FRUGIPERDA
    Expression System Common: FALL ARMYWORM
    Expression System Plasmid: PFASTBAC1
    Expression System Taxid: 7108
    Expression System Vector Type: PLASMID
    Fragment: KINASE DOMAIN, UNP RESIDUES 237-549
    Gene: TGFBR2
    Mutation: YES
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: TGFR-2,TGF-BETA TYPE II RECEPTOR,TRANSFORMING GROWTH FACTOR- BETA RECEPTOR TYPE II,TBETAR-II

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric/Biological Unit (1, 1)
No.NameCountTypeFull Name
15L41Ligand/Ion3-AMINO-6-[4-(2-HYDROXYETHYL)PHENYL]-N-[4-(MORPHOLIN-4-YL)PYRIDIN-3-YL]PYRAZINE-2-CARBOXAMIDE

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREVAL A:250 , VAL A:258 , ALA A:275 , LYS A:277 , LEU A:305 , THR A:325 , ALA A:326 , PHE A:327 , HIS A:328 , ALA A:329 , GLY A:331 , ASN A:332 , MET A:373 , SER A:383 , LEU A:386 , ASP A:397binding site for residue 5L4 A 601

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5E91)

(-) Cis Peptide Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1Asn A:415 -Ser A:416

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5E91)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5E91)

(-) Exons   (0, 0)

(no "Exon" information available for 5E91)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:297
                                                                                                                                                                                                                                                                                                                                         
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeeeeeee....eeeeeee..eeeeeeee..hhhhhhhhhhhhhhhhhh......eeeeeeee....eeeeeeee.....hhhhhhhhh..hhhhhhhhhhhhhhhhhhhhh...........ee....hhh.eee.....eee......ee.................hhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhhhhh.................hhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhh..hhhhh.hhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5e91 A 240 ELLPIELDTLVGKGRFAEVYKAKLKETVAVKIFPYEEYASWKTEKDIFSDINLKHENILQFLTAEERKTELGKQYWLITAFHAKGNLQEYLTRHVISWEDLRKLGSSLARGIAHLHSDHTPCGRPKMPIVHRDLKSSNILVKNDLTCCLCDFGLSLRLDPTLSVDDLANSGQVGTARYMAPEVLASAMNLENVESFKQTDVYSMALVLWEMTSRCNAVGEVKDYEPPFGSKVREHPCVASMADNVLADAGRPEIPSFWLNHQGIQMVCETLTECWDHDPEARLTAQCVAERFSELEH 543
                                   249       259    || 276       286       296       306       316       326       336       346       356       366       376       386       396       406       416       426       436       446       456       466       476       486       496       506       516       526       536       
                                                  264|                                                                                                                                                                                                                                                                               
                                                   272
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5E91)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5E91)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5E91)

(-) Gene Ontology  (103, 103)

Asymmetric/Biological Unit(hide GO term definitions)

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  5e91
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  TGFR2_HUMAN | P37173
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  2.7.11.30
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        TGFR2_HUMAN | P37173: 1ktz 1m9z 1plo 2pjy 3kfd 4p7u 4xjj 5e8v 5e8y 5e92 5tx4 5ty4

(-) Related Entries Specified in the PDB File

5e8s 5e8t 5e8u 5e8v 5e8w 5e8x 5e8y 5e8z 5e90 5e92