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(-) Description

Title :  CRYSTAL STRUCTURE OF HUMAN 14-3-3 ZETA IN COMPLEX WITH CFTR R-DOMAIN PEPTIDE PS753-PS768
 
Authors :  L. M. Stevers, S. F. R. Leysen, C. Ottmann
Date :  05 Aug 15  (Deposition) - 16 Mar 16  (Release) - 16 Mar 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.10
Chains :  Asym./Biol. Unit :  A,B,C
Keywords :  Protein-Peptide Complex, Phosphorylation, Tandem Binding, Peptide Binding Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  L. M. Stevers, C. V. Lam, S. F. Leysen, F. A. Meijer, D. S. Van Scheppingen, R. M. De Vries, G. W. Carlile, L. G. Milroy, D. Y. Thomas, L. Brunsveld, C. Ottmann
Characterization And Small-Molecule Stabilization Of The Multisite Tandem Binding Between 14-3-3 And The R Domain Of Cftr.
Proc. Natl. Acad. Sci. Usa V. 113 E1152 2016
PubMed-ID: 26888287  |  Reference-DOI: 10.1073/PNAS.1516631113

(-) Compounds

Molecule 1 - 14-3-3 PROTEIN ZETA/DELTA
    ChainsA, B
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System Taxid562
    GeneYWHAZ
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606
    SynonymPROTEIN KINASE C INHIBITOR PROTEIN 1,KCIP-1
 
Molecule 2 - CYSTIC FIBROSIS TRANSMEMBRANE CONDUCTANCE REGULATOR
    ChainsC
    EC Number3.6.3.49
    EngineeredYES
    FragmentUNP RESIDUES 747-774
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606
    SynonymCFTR,ATP-BINDING CASSETTE SUB-FAMILY C MEMBER 7,CHANNEL CONDUCTANCE-CONTROLLING ATPASE,CAMP-DEPENDENT CHLORIDE CHANNEL
    SyntheticYES

 Structural Features

(-) Chains, Units

  123
Asymmetric/Biological Unit ABC

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 8)

Asymmetric/Biological Unit (3, 8)
No.NameCountTypeFull Name
1CL4Ligand/IonCHLORIDE ION
2SEP2Mod. Amino AcidPHOSPHOSERINE
3SUC2Ligand/IonSUCROSE

(-) Sites  (5, 5)

Asymmetric Unit (5, 5)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREARG A:55 , ASP A:92 , ASP A:96binding site for residue SUC A 301
2AC2SOFTWARESER A:37 , GLU A:39 , GLU A:40binding site for residue CL A 302
3AC3SOFTWARESER A:28binding site for residue CL A 303
4AC4SOFTWAREARG B:55 , ASP B:92 , ASP B:96 , HOH B:444binding site for residue SUC B 301
5AC5SOFTWARESER B:37 , GLU B:39 , GLU B:40binding site for residue CL B 302

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5D2D)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 5D2D)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5D2D)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5D2D)

(-) Exons   (0, 0)

(no "Exon" information available for 5D2D)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:229
                                                                                                                                                                                                                                                                     
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5d2d A   1 MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWRVVSSIEQKTGAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYLKMKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTS 230
                                    10        20        30        40        50        60        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221         
                                                                                               69|                                                                                                                                                               
                                                                                                71                                                                                                                                                               

Chain B from PDB  Type:PROTEIN  Length:226
                                                                                                                                                                                                                                                                  
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5d2d B   1 MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWRVVSSIEQKTEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFYLKMKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWT 229
                                    10        20        30        40        50        60        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223      
                                                                                               69|                                                                                                                                                            
                                                                                                73                                                                                                                                                            

Chain C from PDB  Type:PROTEIN  Length:19
                                                   
               SCOP domains ------------------- SCOP domains
               CATH domains ------------------- CATH domains
               Pfam domains ------------------- Pfam domains
         Sec.struct. author ................... Sec.struct. author
                 SAPs(SNPs) ------------------- SAPs(SNPs)
                    PROSITE ------------------- PROSITE
                 Transcript ------------------- Transcript
                 5d2d C 751 RIsVISTGRRRQsVLNLMT 774
                              |    765  |      
                            753-SEP8|   |      
                                  764   |      
                                      768-SEP  

   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5D2D)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5D2D)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5D2D)

(-) Gene Ontology  (74, 78)

Asymmetric/Biological Unit(hide GO term definitions)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        1433Z_HUMAN | P631041ib1 1qja 1qjb 2c1j 2c1n 2o02 2wh0 3cu8 3nkx 3rdh 4bg6 4fj3 4hkc 4ihl 4n7g 4n7y 4n84 4wrq 4zdr 5d3f 5ewz 5exa 5j31 5jit 5jiv 5jm4 5nas 5wxn
        CFTR_HUMAN | P135691nbd 1xmi 1xmj 2bbo 2bbs 2bbt 2lob 2pze 2pzf 2pzg 3gd7 3isw 4wz6 5d3e 5d3f 5uak

(-) Related Entries Specified in the PDB File

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