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(-) Description

Title :  CRYSTAL STRUCTURE OF MOZ DOUBLE PHD FINGER DOMAIN IN COMPLEX WITH HISTONE H3 CROTONYLATION AT K14
 
Authors :  H. Li, X. Xiong
Date :  05 Jun 16  (Deposition) - 26 Oct 16  (Release) - 30 Nov 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.65
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Double Phd Finger, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  X. Xiong, T. Panchenko, S. Yang, S. Zhao, P. Yan, W. Zhang, W. Xie, Y. Li, Y. Zhao, C. D. Allis, H. Li
Selective Recognition Of Histone Crotonylation By Double Ph Fingers Of Moz And Dpf2
Nat. Chem. Biol. V. 12 1111 2016
PubMed-ID: 27775714  |  Reference-DOI: 10.1038/NCHEMBIO.2218

(-) Compounds

Molecule 1 - HISTONE ACETYLTRANSFERASE KAT6A
    ChainsA
    EC Number2.3.1.48
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System Taxid562
    FragmentUNP RESIDUES 194-323
    GeneMOZ
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606
    SynonymMOZ
 
Molecule 2 - HISTONE H3
    ChainsB
    EngineeredYES
    FragmentUNP RESIDUES 2-26
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606
    SyntheticYES

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (4, 9)

Asymmetric/Biological Unit (4, 9)
No.NameCountTypeFull Name
1KCR1Mod. Amino AcidN-6-CROTONYL-L-LYSINE
2NH21Mod. Amino AcidAMINO GROUP
3SO43Ligand/IonSULFATE ION
4ZN4Ligand/IonZINC ION

(-) Sites  (7, 7)

Asymmetric Unit (7, 7)
No.NameEvidenceResiduesDescription
1AC1SOFTWARECYS A:281 , CYS A:284 , CYS A:307 , CYS A:310binding site for residue ZN A 401
2AC2SOFTWARECYS A:265 , CYS A:268 , HIS A:289 , CYS A:292binding site for residue ZN A 402
3AC3SOFTWARECYS A:209 , CYS A:212 , HIS A:238 , CYS A:241binding site for residue ZN A 403
4AC4SOFTWARECYS A:230 , CYS A:233 , CYS A:259 , CYS A:262binding site for residue ZN A 404
5AC5SOFTWARELYS A:302 , GLY A:303 , ALA B:1binding site for residue SO4 A 405
6AC6SOFTWAREARG A:299 , HOH A:560binding site for residue SO4 A 406
7AC7SOFTWAREPRO B:16 , ARG B:17 , HOH B:202 , HOH B:205 , HOH B:208binding site for residue SO4 B 101

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5B76)

(-) Cis Peptide Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1Asp A:294 -Pro A:295

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5B76)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5B76)

(-) Exons   (0, 0)

(no "Exon" information available for 5B76)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:120
                                                                                                                                                        
               SCOP domains ------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...................................ee......eehhhhhh.hhhhhhhhhh...................hhhh.ee......eehhhhh................... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------ Transcript
                 5b76 A 193 SLPHEKDKPVAEPIPICSFCLGTKEQNREKKPEELISCADCGNSGHPSCLKFSPELTVRVKALRWQCIECKTCSSCRDQGKNADNMLFCDSCDRGFHMECCDPPLTRMPKGMWICQICRP 312
                                   202       212       222       232       242       252       262       272       282       292       302       312

Chain B from PDB  Type:PROTEIN  Length:26
                                                          
               SCOP domains -------------------------- SCOP domains
               CATH domains -------------------------- CATH domains
               Pfam domains -------------------------- Pfam domains
         Sec.struct. author .eehhhhhhhhh...hhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) -------------------------- SAPs(SNPs)
                    PROSITE -------------------------- PROSITE
                 Transcript -------------------------- Transcript
                 5b76 B   1 ARTKQTARKSTGGkAPRKQLATKAAx  26
                                    10   |    20     |
                                        14-KCR      26-NH2

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5B76)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5B76)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5B76)

(-) Gene Ontology  (33, 36)

Asymmetric/Biological Unit(hide GO term definitions)

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    Asp A:294 - Pro A:295   [ RasMol ]  
 

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        K7EMV3_HUMAN | K7EMV35fb0 5fb1 5ffv 5gh9
        KAT6A_HUMAN | Q927941m36 2ln0 2ozu 2rc4 3v43 4ljn 4lk9 4lka 4llb 5b75 5b77 5b78
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        K7EMV3_HUMAN | K7EMV35b75 5b77 5b78

(-) Related Entries Specified in the PDB File

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