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(-) Description

Title :  CRYSTAL STRUCTURE OF THE SNX27 PDZ DOMAIN BOUND TO THE C-TERMINAL PTHR PDZ BINDING MOTIF
 
Authors :  T. Clairfeuille, N. Pavlos, B. M. Collins
Date :  09 Apr 15  (Deposition) - 24 Feb 16  (Release) - 24 Feb 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  0.95
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Pdz Domain, Snx27, Pthr, Protein Transport (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  T. Clairfeuille, R. D. Teasdale, B. M. Collins, N. Pavlos
Role Of Snx27-Retromer In Pthr Trafficking
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - SORTING NEXIN-27
    ChainsA
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System Taxid562
    FragmentPDZ DOMAIN (UNP RESIDUES 39-133)
    GeneSNX27, MRT1
    Organism CommonRAT
    Organism ScientificRATTUS NORVEGICUS
    Organism Taxid10116
    SynonymMAP-RESPONSIVE GENE PROTEIN,METHAMPHETAMINE-RESPONSIVE TRANSCRIPT 1 PROTEIN,PDZ-PROTEIN MRT1
 
Molecule 2 - C-TERMINAL PDZ BINDING MOTIF FROM PARATHYROID HORMONE RECEPTOR (PTHR)
    ChainsB
    EngineeredYES
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606
    SyntheticYES

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 4Z8J)

(-) Sites  (0, 0)

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(-) SS Bonds  (0, 0)

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(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:96
                                                                                                                                
               SCOP domains ------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..eeeeee.......eeeeee.......eee..eee....eeeee...hhhhhhh.....eeeee..ee....hhhhhhhhhh....eeeeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------ Transcript
                 4z8j A  38 SPRVVRIVKSESGYGFNVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGVRKGDRILEVNGVNVEGATHKQVVDLIRAGEKELILTVLSV 133
                                    47        57        67        77        87        97       107       117       127      

Chain B from PDB  Type:PROTEIN  Length:7
                                       
               SCOP domains ------- SCOP domains
               CATH domains ------- CATH domains
               Pfam domains ------- Pfam domains
         Sec.struct. author .eeeeee Sec.struct. author
                 SAPs(SNPs) ------- SAPs(SNPs)
                    PROSITE ------- PROSITE
                 Transcript ------- Transcript
                 4z8j B 587 EEWETVM 593

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 Classification and Annotation

(-) SCOP Domains  (0, 0)

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(-) CATH Domains  (0, 0)

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(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4Z8J)

(-) Gene Ontology  (56, 61)

Asymmetric/Biological Unit(hide GO term definitions)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        PTH1R_HUMAN | Q034311bl1 1et2 1et3 3c4m 3h3g 3l2j 5emb
        SNX27_RAT | Q8K4V43qdo 3qe1 3qgl 4p2a 5elq 5em9 5ema 5emb

(-) Related Entries Specified in the PDB File

5elq 5em9 5ema 5emb 5emy