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(-) Description

Title :  STRUCTURE OF THE FIRST TWO THIOREDOXIN DOMAINS OF NAUMOVOZYMA DAIRENENSIS EPS1P
 
Authors :  F. Deborah, S. Biran
Date :  26 Jun 14  (Deposition) - 17 Dec 14  (Release) - 27 Jul 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.80
Chains :  Asym./Biol. Unit :  A
Keywords :  Protein Disulfide Isomerase, Thioredoxin, Endoplasmic Reticulum, Oxidoreductase, Isomerase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  S. Biran, Y. Gat, D. Fass
The Eps1P Protein Disulfide Isomerase Conserves Classic Thioredoxin Superfamily Amino Acid Motifs But Not Their Functional Geometries.
Plos One V. 9 13431 2014
PubMed-ID: 25437863  |  Reference-DOI: 10.1371/JOURNAL.PONE.0113431

(-) Compounds

Molecule 1 - NAUMOVOZYMA DAIRENENSIS EPS1P
    Chains: A
    EC Number: 5.4.3.1
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET15B
    Expression System Strain: ORIGAMI B
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Fragment: UNP RESIDUES 32-294
    Gene: NDAI0B01070, NDAI_0B01070
    Organism Scientific: NAUMOVOZYMA DAIRENENSIS
    Organism Taxid: 1071378
    Strain: ATCC 10597 / BCRC 20456 / CBS 421 / NBRC 0211 / NRRL Y- 12639

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 4TVE)

(-) Sites  (0, 0)

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(-) SS Bonds  (4, 4)

Asymmetric/Biological Unit
No.Residues
1A:62 -A:65
2A:95 -A:102
3A:199 -A:202
4A:228 -A:235

(-) Cis Peptide Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1Phe A:110 -Pro A:111

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:263
                                                                                                                                                                                                                                                                                                       
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ............hhhhhhh..eeeeeee........hhhhhhhhhhhhhhhhhhhh.eeeeeee...hhhhhhhh......eeeeee..eeeee.....hhhhhhhhhhhhhh.....hhhhh....ee.hhhhhhhhhh......eeeeee..................hhhhhhhhhhhhhhhhhh...eeeeee...hhhhhhhh.hhhhhh..........eeeee........eee.......hhhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4tve A  31 SPEGFPKPLTGSTFDNEMKNGLHIVEFFSPYCHHCKSLAPIWEKTWESFHEEGSKLNITLSQVNCVEDGDLCSKENIEYFPYIKLYGPSGFIKNYDGARKEEAFIKFARKEALDPLNVDISHVESQSILLSKLEFAKYLAGKGKDPILISFWPTNEMKNSDDRIAFENCADCTTFQRAWKMLSKNLLADGVLTGHMNCEENPLICNELGFGELSKIKNHRSDRVPRVALVLPNRATNNLFIFKGDIASPLSQYQDFATRTYAN 293
                                    40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290
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 Classification and Annotation

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(-) CATH Domains  (0, 0)

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(-) Pfam Domains  (0, 0)

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(-) Gene Ontology  (12, 12)

Asymmetric/Biological Unit(hide GO term definitions)

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    Phe A:110 - Pro A:111   [ RasMol ]  
 

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(-) Related Entries Specified in the PDB File

4tw5