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(-) Description

Title :  MYCOBACTERIUM AVIUM SUBS PARATUBERCULOSIS TESB PROTEIN MAP1729C
 
Authors :  C. M. D. Swarbrick, J. K. Forwood
Date :  08 Sep 14  (Deposition) - 08 Oct 14  (Release) - 08 Oct 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.60
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Thioesterase, Double Hot-Dog, Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  C. M. D. Swarbrick, J. K. Forwood
Mycobacterium Avium Subs Paratuberculosis Tesb Protein Map1729C
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - UNCHARACTERIZED PROTEIN
    Chains: A, B
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PMCSG21
    Expression System Strain: BL21DE3 PLYSS
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Gene: MAP_1729C
    Organism Scientific: MYCOBACTERIUM AVIUM SUBSP. PARATUBERCULOSIS
    Organism Taxid: 262316
    Strain: K-10

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 4R9Z)

(-) Sites  (0, 0)

(no "Site" information available for 4R9Z)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4R9Z)

(-) Cis Peptide Bonds  (5, 5)

Asymmetric/Biological Unit
No.Residues
1Ala A:151 -Ser A:152
2Ser A:152 -Leu A:153
3Pro A:167 -Pro A:168
4Ala B:31 -Asn B:32
5Pro B:167 -Pro B:168

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4R9Z)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4R9Z)

(-) Exons   (0, 0)

(no "Exon" information available for 4R9Z)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:245
                                                                                                                                                                                                                                                                                     
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhh.eeee..eeee....hhhhh.hhhhhhhhhhhhhhhh....eeeeeeeee.........eeeeeeeeee...eeeeeeeeee..eeeeeeeeeee...ee..................eeeee............eeeee......hhhhhhhhhhhhhhhhhhhhhhhhh......eeeeeeeee.........eeeeeeeeeee..eeeeeeeeee....eeeeeeeeee... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4r9z A   4 SLGDVLATLELERVGQWRFVGQQLPAPANHILGGHISAQALLAASRTAAGREPHSVHTYFLRPGDSRQPVDFEVVDLQEGRTFSARRVTARQDDKILMEAMSSFKVQVVYQPIMPEAPSPESLASLRWFERRTIETETVPPARVPMWWRPDGRVPDDPVLTASLVAYMSAVTLTEPAFAARGGVGASAQRDHSVWFHGRAVLSDWLFYDRSSPSSAGSLALASGTMFNRTGELVCTVKQEMYFPP 272
                                    13        23        33        43        53        63        73        83        93       103     ||119       129  ||   157       167       177       187       197       207       217       227       237       247       257       267     
                                                                                                                                   109|             132|                                                                                                                         
                                                                                                                                    116              151                                                                                                                         


Chain B from PDB  Type:PROTEIN  Length:248
                                                                                                                                                                                                                                                                                        
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhh.ee....eeee..........hhhhhhhhhhhhhhhh....eeeeeeeee.........eeeeeeeeee...eeeeeeeeee..eeeeeeeeeee.....ee..................eeeee............eeeee......hhhhhhhhhhhhhhhhhhhhhhhhhh.....eeeeeeeee.........eeeeee...ee..eeeeeeeeee....eeeeeeeeee... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4r9z B   3 SSLGDVLATLELERVGQWRFVGQQLPAPANHILGGHISAQALLAASRTAAGREPHSVHTYFLRPGDSRQPVDFEVVDLQEGRTFSARRVTARQDDKILMEAMSSFKVVNQVVYQPIMPEAPSPESWASLRWFERRTIETETVPPARVPMWWRPDGRVPDDPVLTASLVAYMSAVTLTEPAFAARGGVGASAQRDHSVWFHGRAVLSDWLFYDRSSPSSAGSLALASGTMFNRTGELVCTVKQEMYFPP 272
                                    12        22        32        42        52        62        72        82        92       102       116       126    || 154       164       174       184       194       204       214       224       234       244       254       264        
                                                                                                                                      111|            131|                                                                                                                          
                                                                                                                                       116             150
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4R9Z)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4R9Z)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4R9Z)

(-) Gene Ontology  (2, 2)

Asymmetric/Biological Unit(hide GO term definitions)

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  Ligands, Modified Residues, Ions
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  Sites
(no "Sites" information available for 4r9z)
 
  Cis Peptide Bonds
    Ala A:151 - Ser A:152   [ RasMol ]  
    Ala B:31 - Asn B:32   [ RasMol ]  
    Pro A:167 - Pro A:168   [ RasMol ]  
    Pro B:167 - Pro B:168   [ RasMol ]  
    Ser A:152 - Leu A:153   [ RasMol ]  
 

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 Related Entries

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